Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cpsf7Q8BTV2 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cpsf7Q8BTV2 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cpsf7Q8BTV2 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cpsf7Q8BTV2 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.76□□□□□ -0.21
Cpsf7Q8BTV2 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Cpsf7Q8BTV2 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cpsf7Q8BTV2 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cpsf7Q8BTV2 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cpsf7Q8BTV2 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Cpsf7Q8BTV2 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cpsf7Q8BTV2 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Cpsf7Q8BTV2 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf7Q8BTV2 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf7Q8BTV2 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf7Q8BTV2 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
Cpsf7Q8BTV2 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.75□□□□□ -0.21
Cpsf7Q8BTV2 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Cpsf7Q8BTV2 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf7Q8BTV2 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf7Q8BTV2 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf7Q8BTV2 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf7Q8BTV2 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Cpsf7Q8BTV2 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Cpsf7Q8BTV2 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf7Q8BTV2 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.75□□□□□ -0.21
Cpsf7Q8BTV2 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.75□□□□□ -0.21
Cpsf7Q8BTV2 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Cpsf7Q8BTV2 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf7Q8BTV2 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.75□□□□□ -0.21
Cpsf7Q8BTV2 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.75□□□□□ -0.21
Cpsf7Q8BTV2 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.75□□□□□ -0.21
Cpsf7Q8BTV2 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf7Q8BTV2 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.75□□□□□ -0.21
Cpsf7Q8BTV2 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf7Q8BTV2 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf7Q8BTV2 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf7Q8BTV2 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf7Q8BTV2 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf7Q8BTV2 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.75□□□□□ -0.21
Cpsf7Q8BTV2 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf7Q8BTV2 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.75□□□□□ -0.21
Cpsf7Q8BTV2 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf7Q8BTV2 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf7Q8BTV2 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf7Q8BTV2 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf7Q8BTV2 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf7Q8BTV2 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf7Q8BTV2 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf7Q8BTV2 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Cpsf7Q8BTV2 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.74□□□□□ -0.21
Cpsf7Q8BTV2 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf7Q8BTV2 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.74□□□□□ -0.21
Cpsf7Q8BTV2 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.74□□□□□ -0.21
Cpsf7Q8BTV2 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf7Q8BTV2 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Cpsf7Q8BTV2 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf7Q8BTV2 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf7Q8BTV2 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf7Q8BTV2 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.74□□□□□ -0.21
Cpsf7Q8BTV2 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf7Q8BTV2 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf7Q8BTV2 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.74□□□□□ -0.21
Cpsf7Q8BTV2 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf7Q8BTV2 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Cpsf7Q8BTV2 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.74□□□□□ -0.21
Cpsf7Q8BTV2 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf7Q8BTV2 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf7Q8BTV2 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.74□□□□□ -0.21
Cpsf7Q8BTV2 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.74□□□□□ -0.21
Cpsf7Q8BTV2 Gm20553-201ENSMUST00000204205 844 ntBASIC13.74□□□□□ -0.21
Cpsf7Q8BTV2 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.74□□□□□ -0.21
Cpsf7Q8BTV2 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf7Q8BTV2 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Cpsf7Q8BTV2 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf7Q8BTV2 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf7Q8BTV2 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf7Q8BTV2 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Cpsf7Q8BTV2 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf7Q8BTV2 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf7Q8BTV2 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.74□□□□□ -0.21
Cpsf7Q8BTV2 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.74□□□□□ -0.21
Cpsf7Q8BTV2 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf7Q8BTV2 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf7Q8BTV2 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf7Q8BTV2 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.74□□□□□ -0.21
Cpsf7Q8BTV2 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Cpsf7Q8BTV2 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf7Q8BTV2 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf7Q8BTV2 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf7Q8BTV2 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpsf7Q8BTV2 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.73□□□□□ -0.21
Cpsf7Q8BTV2 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.73□□□□□ -0.21
Cpsf7Q8BTV2 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cpsf7Q8BTV2 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpsf7Q8BTV2 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpsf7Q8BTV2 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpsf7Q8BTV2 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Cpsf7Q8BTV2 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpsf7Q8BTV2 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms