Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Snora78-201ENSMUST00000158630 128 ntBASIC14.53□□□□□ -0.08
Rd3Q8BRE0 Gm37424-201ENSMUST00000191727 561 ntBASIC14.53□□□□□ -0.08
Rd3Q8BRE0 Gm42693-201ENSMUST00000196779 631 ntBASIC14.53□□□□□ -0.08
Rd3Q8BRE0 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rd3Q8BRE0 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rd3Q8BRE0 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rd3Q8BRE0 Gm10012-201ENSMUST00000078252 192 ntBASIC14.53□□□□□ -0.08
Rd3Q8BRE0 Gm10478-201ENSMUST00000084451 396 ntBASIC14.53□□□□□ -0.08
Rd3Q8BRE0 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.53□□□□□ -0.08
Rd3Q8BRE0 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rd3Q8BRE0 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rd3Q8BRE0 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rd3Q8BRE0 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.53□□□□□ -0.08
Rd3Q8BRE0 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rd3Q8BRE0 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rd3Q8BRE0 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rd3Q8BRE0 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rd3Q8BRE0 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rd3Q8BRE0 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rd3Q8BRE0 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rd3Q8BRE0 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Rd3Q8BRE0 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rd3Q8BRE0 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rd3Q8BRE0 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rd3Q8BRE0 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rd3Q8BRE0 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rd3Q8BRE0 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Rd3Q8BRE0 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
Rd3Q8BRE0 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rd3Q8BRE0 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Rd3Q8BRE0 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Rd3Q8BRE0 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rd3Q8BRE0 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Rd3Q8BRE0 Gm22331-201ENSMUST00000158066 136 ntBASIC14.52□□□□□ -0.09
Rd3Q8BRE0 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Rd3Q8BRE0 Gm8565-201ENSMUST00000183259 1014 ntBASIC14.52□□□□□ -0.09
Rd3Q8BRE0 Gm29127-201ENSMUST00000188304 517 ntBASIC14.52□□□□□ -0.09
Rd3Q8BRE0 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.52□□□□□ -0.09
Rd3Q8BRE0 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rd3Q8BRE0 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rd3Q8BRE0 Gm5161-201ENSMUST00000075243 853 ntBASIC14.52□□□□□ -0.09
Rd3Q8BRE0 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.52□□□□□ -0.09
Rd3Q8BRE0 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rd3Q8BRE0 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rd3Q8BRE0 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rd3Q8BRE0 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rd3Q8BRE0 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rd3Q8BRE0 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Rd3Q8BRE0 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rd3Q8BRE0 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rd3Q8BRE0 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rd3Q8BRE0 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rd3Q8BRE0 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rd3Q8BRE0 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rd3Q8BRE0 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rd3Q8BRE0 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rd3Q8BRE0 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rd3Q8BRE0 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rd3Q8BRE0 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rd3Q8BRE0 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rd3Q8BRE0 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rd3Q8BRE0 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rd3Q8BRE0 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rd3Q8BRE0 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rd3Q8BRE0 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rd3Q8BRE0 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rd3Q8BRE0 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Rd3Q8BRE0 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.51□□□□□ -0.09
Rd3Q8BRE0 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC14.51□□□□□ -0.09
Rd3Q8BRE0 Gm24644-201ENSMUST00000157114 139 ntBASIC14.51□□□□□ -0.09
Rd3Q8BRE0 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC14.51□□□□□ -0.09
Rd3Q8BRE0 Gm8584-201ENSMUST00000171982 758 ntBASIC14.51□□□□□ -0.09
Rd3Q8BRE0 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Rd3Q8BRE0 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC14.51□□□□□ -0.09
Rd3Q8BRE0 Gm38319-201ENSMUST00000194537 1266 ntBASIC14.51□□□□□ -0.09
Rd3Q8BRE0 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rd3Q8BRE0 Gm44974-201ENSMUST00000206387 1279 ntBASIC14.51□□□□□ -0.09
Rd3Q8BRE0 Gm45331-201ENSMUST00000209868 554 ntBASIC14.51□□□□□ -0.09
Rd3Q8BRE0 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Rd3Q8BRE0 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC14.51□□□□□ -0.09
Rd3Q8BRE0 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Rd3Q8BRE0 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rd3Q8BRE0 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rd3Q8BRE0 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rd3Q8BRE0 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rd3Q8BRE0 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC14.51□□□□□ -0.09
Rd3Q8BRE0 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rd3Q8BRE0 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Rd3Q8BRE0 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.51□□□□□ -0.09
Rd3Q8BRE0 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rd3Q8BRE0 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rd3Q8BRE0 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rd3Q8BRE0 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rd3Q8BRE0 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rd3Q8BRE0 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rd3Q8BRE0 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rd3Q8BRE0 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rd3Q8BRE0 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rd3Q8BRE0 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rd3Q8BRE0 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms