Protein–RNA interactions for Protein: Q8BQN5

Fam78b, Protein FAM78B, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam78bQ8BQN5 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Fam78bQ8BQN5 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Fam78bQ8BQN5 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Fam78bQ8BQN5 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Fam78bQ8BQN5 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Fam78bQ8BQN5 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Fam78bQ8BQN5 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Fam78bQ8BQN5 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Fam78bQ8BQN5 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Fam78bQ8BQN5 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Fam78bQ8BQN5 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Fam78bQ8BQN5 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC11□□□□□ -0.65
Fam78bQ8BQN5 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
Fam78bQ8BQN5 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Fam78bQ8BQN5 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Fam78bQ8BQN5 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Fam78bQ8BQN5 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11□□□□□ -0.65
Fam78bQ8BQN5 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Fam78bQ8BQN5 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Fam78bQ8BQN5 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Fam78bQ8BQN5 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Fam78bQ8BQN5 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Fam78bQ8BQN5 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11□□□□□ -0.65
Fam78bQ8BQN5 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC11□□□□□ -0.65
Fam78bQ8BQN5 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC11□□□□□ -0.65
Fam78bQ8BQN5 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Fam78bQ8BQN5 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Fam78bQ8BQN5 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC11□□□□□ -0.65
Fam78bQ8BQN5 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC11□□□□□ -0.65
Fam78bQ8BQN5 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Fam78bQ8BQN5 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC11□□□□□ -0.65
Fam78bQ8BQN5 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC11□□□□□ -0.65
Fam78bQ8BQN5 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Fam78bQ8BQN5 Mir7036b-201ENSMUST00000184791 63 ntBASIC11□□□□□ -0.65
Fam78bQ8BQN5 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC11□□□□□ -0.65
Fam78bQ8BQN5 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC11□□□□□ -0.65
Fam78bQ8BQN5 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Fam78bQ8BQN5 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Fam78bQ8BQN5 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Fam78bQ8BQN5 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Fam78bQ8BQN5 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Fam78bQ8BQN5 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Fam78bQ8BQN5 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC11□□□□□ -0.65
Fam78bQ8BQN5 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Fam78bQ8BQN5 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC11□□□□□ -0.65
Fam78bQ8BQN5 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11□□□□□ -0.65
Fam78bQ8BQN5 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Fam78bQ8BQN5 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Fam78bQ8BQN5 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Fam78bQ8BQN5 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Fam78bQ8BQN5 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Fam78bQ8BQN5 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Fam78bQ8BQN5 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Fam78bQ8BQN5 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11□□□□□ -0.65
Fam78bQ8BQN5 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Fam78bQ8BQN5 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Fam78bQ8BQN5 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Fam78bQ8BQN5 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Fam78bQ8BQN5 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Fam78bQ8BQN5 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
Fam78bQ8BQN5 Gm9347-201ENSMUST00000211473 1607 ntBASIC10.99□□□□□ -0.65
Fam78bQ8BQN5 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Fam78bQ8BQN5 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Fam78bQ8BQN5 Gm27196-201ENSMUST00000184787 2582 ntBASIC10.99□□□□□ -0.65
Fam78bQ8BQN5 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Fam78bQ8BQN5 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Fam78bQ8BQN5 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC10.99□□□□□ -0.65
Fam78bQ8BQN5 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Fam78bQ8BQN5 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Fam78bQ8BQN5 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Fam78bQ8BQN5 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Fam78bQ8BQN5 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Fam78bQ8BQN5 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Fam78bQ8BQN5 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Fam78bQ8BQN5 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC10.99□□□□□ -0.65
Fam78bQ8BQN5 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC10.99□□□□□ -0.65
Fam78bQ8BQN5 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Fam78bQ8BQN5 Gm43332-201ENSMUST00000202511 1044 ntBASIC10.99□□□□□ -0.65
Fam78bQ8BQN5 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Fam78bQ8BQN5 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC10.99□□□□□ -0.65
Fam78bQ8BQN5 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Fam78bQ8BQN5 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Fam78bQ8BQN5 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Fam78bQ8BQN5 AC238940.1-201ENSMUST00000225106 1858 ntBASIC10.99□□□□□ -0.65
Fam78bQ8BQN5 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Fam78bQ8BQN5 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Fam78bQ8BQN5 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC10.99□□□□□ -0.65
Fam78bQ8BQN5 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Fam78bQ8BQN5 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Fam78bQ8BQN5 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Fam78bQ8BQN5 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
Fam78bQ8BQN5 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Fam78bQ8BQN5 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Fam78bQ8BQN5 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
Fam78bQ8BQN5 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Fam78bQ8BQN5 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Fam78bQ8BQN5 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC10.99□□□□□ -0.65
Fam78bQ8BQN5 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Fam78bQ8BQN5 Gm44241-201ENSMUST00000203230 1662 ntBASIC10.98□□□□□ -0.65
Fam78bQ8BQN5 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms