Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col16a1Q8BLX7 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col16a1Q8BLX7 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Col16a1Q8BLX7 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC17.65■□□□□ 0.42
Col16a1Q8BLX7 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC17.65■□□□□ 0.42
Col16a1Q8BLX7 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Col16a1Q8BLX7 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col16a1Q8BLX7 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Col16a1Q8BLX7 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Col16a1Q8BLX7 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col16a1Q8BLX7 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC17.65■□□□□ 0.42
Col16a1Q8BLX7 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Col16a1Q8BLX7 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Col16a1Q8BLX7 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col16a1Q8BLX7 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col16a1Q8BLX7 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Col16a1Q8BLX7 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col16a1Q8BLX7 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col16a1Q8BLX7 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col16a1Q8BLX7 Gm6161-201ENSMUST00000121942 1102 ntBASIC17.65■□□□□ 0.42
Col16a1Q8BLX7 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Col16a1Q8BLX7 Gm6254-201ENSMUST00000168178 1072 ntBASIC17.65■□□□□ 0.42
Col16a1Q8BLX7 Gm6153-201ENSMUST00000172004 1058 ntBASIC17.65■□□□□ 0.42
Col16a1Q8BLX7 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Col16a1Q8BLX7 Gm8176-201ENSMUST00000191297 1099 ntBASIC17.65■□□□□ 0.42
Col16a1Q8BLX7 Gm5641-202ENSMUST00000198699 1080 ntBASIC17.65■□□□□ 0.42
Col16a1Q8BLX7 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col16a1Q8BLX7 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col16a1Q8BLX7 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col16a1Q8BLX7 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col16a1Q8BLX7 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Col16a1Q8BLX7 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col16a1Q8BLX7 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col16a1Q8BLX7 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Col16a1Q8BLX7 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Col16a1Q8BLX7 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col16a1Q8BLX7 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC17.64■□□□□ 0.41
Col16a1Q8BLX7 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col16a1Q8BLX7 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC17.64■□□□□ 0.41
Col16a1Q8BLX7 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC17.64■□□□□ 0.41
Col16a1Q8BLX7 Gm8738-201ENSMUST00000172606 329 ntBASIC17.64■□□□□ 0.41
Col16a1Q8BLX7 AA914427-201ENSMUST00000193194 1166 ntBASIC17.64■□□□□ 0.41
Col16a1Q8BLX7 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Col16a1Q8BLX7 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col16a1Q8BLX7 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Col16a1Q8BLX7 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Col16a1Q8BLX7 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Col16a1Q8BLX7 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col16a1Q8BLX7 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col16a1Q8BLX7 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col16a1Q8BLX7 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC17.64■□□□□ 0.41
Col16a1Q8BLX7 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Col16a1Q8BLX7 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col16a1Q8BLX7 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Col16a1Q8BLX7 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col16a1Q8BLX7 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col16a1Q8BLX7 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Col16a1Q8BLX7 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Col16a1Q8BLX7 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC17.63■□□□□ 0.41
Col16a1Q8BLX7 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col16a1Q8BLX7 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC17.63■□□□□ 0.41
Col16a1Q8BLX7 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
Col16a1Q8BLX7 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC17.63■□□□□ 0.41
Col16a1Q8BLX7 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC17.63■□□□□ 0.41
Col16a1Q8BLX7 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC17.63■□□□□ 0.41
Col16a1Q8BLX7 Gm18615-201ENSMUST00000222919 1031 ntBASIC17.63■□□□□ 0.41
Col16a1Q8BLX7 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col16a1Q8BLX7 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col16a1Q8BLX7 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col16a1Q8BLX7 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Col16a1Q8BLX7 Mmp14-206ENSMUST00000225641 3238 ntBASIC17.63■□□□□ 0.41
Col16a1Q8BLX7 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Col16a1Q8BLX7 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Col16a1Q8BLX7 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col16a1Q8BLX7 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Col16a1Q8BLX7 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col16a1Q8BLX7 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col16a1Q8BLX7 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col16a1Q8BLX7 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Col16a1Q8BLX7 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col16a1Q8BLX7 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Col16a1Q8BLX7 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col16a1Q8BLX7 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col16a1Q8BLX7 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Col16a1Q8BLX7 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col16a1Q8BLX7 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Col16a1Q8BLX7 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC17.62■□□□□ 0.41
Col16a1Q8BLX7 Gm13570-201ENSMUST00000140763 309 ntBASIC17.62■□□□□ 0.41
Col16a1Q8BLX7 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC17.62■□□□□ 0.41
Col16a1Q8BLX7 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
Col16a1Q8BLX7 Abhd11os-203ENSMUST00000222613 363 ntBASIC17.62■□□□□ 0.41
Col16a1Q8BLX7 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC17.62■□□□□ 0.41
Col16a1Q8BLX7 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col16a1Q8BLX7 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col16a1Q8BLX7 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC17.62■□□□□ 0.41
Col16a1Q8BLX7 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col16a1Q8BLX7 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col16a1Q8BLX7 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col16a1Q8BLX7 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col16a1Q8BLX7 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms