Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SynbQ8BI41 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.15□□□□□ -0.3
SynbQ8BI41 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
SynbQ8BI41 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SynbQ8BI41 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
SynbQ8BI41 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SynbQ8BI41 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SynbQ8BI41 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SynbQ8BI41 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SynbQ8BI41 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SynbQ8BI41 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SynbQ8BI41 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
SynbQ8BI41 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
SynbQ8BI41 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SynbQ8BI41 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.15□□□□□ -0.3
SynbQ8BI41 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SynbQ8BI41 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
SynbQ8BI41 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.15□□□□□ -0.3
SynbQ8BI41 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC13.15□□□□□ -0.3
SynbQ8BI41 Gm27701-201ENSMUST00000184498 110 ntBASIC13.15□□□□□ -0.3
SynbQ8BI41 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.15□□□□□ -0.3
SynbQ8BI41 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.15□□□□□ -0.3
SynbQ8BI41 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.15□□□□□ -0.3
SynbQ8BI41 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.15□□□□□ -0.3
SynbQ8BI41 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.15□□□□□ -0.3
SynbQ8BI41 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.15□□□□□ -0.3
SynbQ8BI41 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SynbQ8BI41 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
SynbQ8BI41 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.15□□□□□ -0.3
SynbQ8BI41 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.15□□□□□ -0.31
SynbQ8BI41 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
SynbQ8BI41 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
SynbQ8BI41 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SynbQ8BI41 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SynbQ8BI41 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SynbQ8BI41 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
SynbQ8BI41 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SynbQ8BI41 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SynbQ8BI41 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.14□□□□□ -0.31
SynbQ8BI41 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SynbQ8BI41 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SynbQ8BI41 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
SynbQ8BI41 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.14□□□□□ -0.31
SynbQ8BI41 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SynbQ8BI41 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SynbQ8BI41 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
SynbQ8BI41 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.14□□□□□ -0.31
SynbQ8BI41 Mir1938-201ENSMUST00000158746 100 ntBASIC13.14□□□□□ -0.31
SynbQ8BI41 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.14□□□□□ -0.31
SynbQ8BI41 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SynbQ8BI41 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.14□□□□□ -0.31
SynbQ8BI41 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.14□□□□□ -0.31
SynbQ8BI41 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SynbQ8BI41 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SynbQ8BI41 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
SynbQ8BI41 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SynbQ8BI41 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.14□□□□□ -0.31
SynbQ8BI41 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
SynbQ8BI41 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.14□□□□□ -0.31
SynbQ8BI41 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SynbQ8BI41 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SynbQ8BI41 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SynbQ8BI41 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SynbQ8BI41 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
SynbQ8BI41 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SynbQ8BI41 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.13□□□□□ -0.31
SynbQ8BI41 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
SynbQ8BI41 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
SynbQ8BI41 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SynbQ8BI41 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SynbQ8BI41 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SynbQ8BI41 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SynbQ8BI41 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SynbQ8BI41 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.13□□□□□ -0.31
SynbQ8BI41 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SynbQ8BI41 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SynbQ8BI41 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SynbQ8BI41 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SynbQ8BI41 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.13□□□□□ -0.31
SynbQ8BI41 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.13□□□□□ -0.31
SynbQ8BI41 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.13□□□□□ -0.31
SynbQ8BI41 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SynbQ8BI41 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
SynbQ8BI41 Gm10275-202ENSMUST00000168697 495 ntBASIC13.13□□□□□ -0.31
SynbQ8BI41 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SynbQ8BI41 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.13□□□□□ -0.31
SynbQ8BI41 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.13□□□□□ -0.31
SynbQ8BI41 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SynbQ8BI41 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.13□□□□□ -0.31
SynbQ8BI41 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SynbQ8BI41 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.13□□□□□ -0.31
SynbQ8BI41 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SynbQ8BI41 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
SynbQ8BI41 Gm10275-201ENSMUST00000092620 635 ntBASIC13.13□□□□□ -0.31
SynbQ8BI41 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SynbQ8BI41 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SynbQ8BI41 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
SynbQ8BI41 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.13□□□□□ -0.31
SynbQ8BI41 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SynbQ8BI41 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms