Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trnp1Q80ZI1 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trnp1Q80ZI1 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trnp1Q80ZI1 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trnp1Q80ZI1 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC15.33■□□□□ 0.05
Trnp1Q80ZI1 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trnp1Q80ZI1 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trnp1Q80ZI1 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trnp1Q80ZI1 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trnp1Q80ZI1 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trnp1Q80ZI1 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trnp1Q80ZI1 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Trnp1Q80ZI1 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trnp1Q80ZI1 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trnp1Q80ZI1 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trnp1Q80ZI1 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trnp1Q80ZI1 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trnp1Q80ZI1 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trnp1Q80ZI1 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trnp1Q80ZI1 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trnp1Q80ZI1 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC15.33■□□□□ 0.04
Trnp1Q80ZI1 Gm12715-201ENSMUST00000121430 1128 ntBASIC15.33■□□□□ 0.04
Trnp1Q80ZI1 Gm14017-201ENSMUST00000121934 386 ntBASIC15.33■□□□□ 0.04
Trnp1Q80ZI1 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trnp1Q80ZI1 Gm22902-201ENSMUST00000158488 302 ntBASIC15.33■□□□□ 0.04
Trnp1Q80ZI1 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trnp1Q80ZI1 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
Trnp1Q80ZI1 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trnp1Q80ZI1 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC15.33■□□□□ 0.04
Trnp1Q80ZI1 Gm45186-201ENSMUST00000206874 478 ntBASIC15.33■□□□□ 0.04
Trnp1Q80ZI1 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC15.33■□□□□ 0.04
Trnp1Q80ZI1 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trnp1Q80ZI1 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trnp1Q80ZI1 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Trnp1Q80ZI1 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trnp1Q80ZI1 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trnp1Q80ZI1 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trnp1Q80ZI1 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.33■□□□□ 0.04
Trnp1Q80ZI1 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trnp1Q80ZI1 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trnp1Q80ZI1 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trnp1Q80ZI1 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trnp1Q80ZI1 Gm9856-201ENSMUST00000217077 2578 ntBASIC15.32■□□□□ 0.04
Trnp1Q80ZI1 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trnp1Q80ZI1 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trnp1Q80ZI1 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trnp1Q80ZI1 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC15.32■□□□□ 0.04
Trnp1Q80ZI1 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Trnp1Q80ZI1 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.32■□□□□ 0.04
Trnp1Q80ZI1 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.32■□□□□ 0.04
Trnp1Q80ZI1 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Trnp1Q80ZI1 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trnp1Q80ZI1 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC15.32■□□□□ 0.04
Trnp1Q80ZI1 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trnp1Q80ZI1 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Trnp1Q80ZI1 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trnp1Q80ZI1 Gm6447-201ENSMUST00000118905 835 ntBASIC15.32■□□□□ 0.04
Trnp1Q80ZI1 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trnp1Q80ZI1 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trnp1Q80ZI1 Gm24990-201ENSMUST00000157406 323 ntBASIC15.32■□□□□ 0.04
Trnp1Q80ZI1 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
Trnp1Q80ZI1 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trnp1Q80ZI1 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC15.32■□□□□ 0.04
Trnp1Q80ZI1 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC15.32■□□□□ 0.04
Trnp1Q80ZI1 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trnp1Q80ZI1 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trnp1Q80ZI1 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trnp1Q80ZI1 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trnp1Q80ZI1 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trnp1Q80ZI1 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC15.32■□□□□ 0.04
Trnp1Q80ZI1 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trnp1Q80ZI1 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trnp1Q80ZI1 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trnp1Q80ZI1 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trnp1Q80ZI1 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trnp1Q80ZI1 Gm38049-201ENSMUST00000195698 1372 ntBASIC15.32■□□□□ 0.04
Trnp1Q80ZI1 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trnp1Q80ZI1 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Trnp1Q80ZI1 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Trnp1Q80ZI1 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trnp1Q80ZI1 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trnp1Q80ZI1 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trnp1Q80ZI1 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trnp1Q80ZI1 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trnp1Q80ZI1 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trnp1Q80ZI1 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Trnp1Q80ZI1 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trnp1Q80ZI1 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trnp1Q80ZI1 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trnp1Q80ZI1 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trnp1Q80ZI1 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trnp1Q80ZI1 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trnp1Q80ZI1 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC15.31■□□□□ 0.04
Trnp1Q80ZI1 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC15.31■□□□□ 0.04
Trnp1Q80ZI1 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trnp1Q80ZI1 Gm26185-201ENSMUST00000157692 266 ntBASIC15.31■□□□□ 0.04
Trnp1Q80ZI1 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC15.31■□□□□ 0.04
Trnp1Q80ZI1 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trnp1Q80ZI1 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Trnp1Q80ZI1 Gm37986-201ENSMUST00000193285 383 ntBASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms