Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Usp6nlQ80XC3 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp6nlQ80XC3 Gm9823-201ENSMUST00000051212 327 ntBASIC15.11■□□□□ 0.01
Usp6nlQ80XC3 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Usp6nlQ80XC3 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp6nlQ80XC3 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp6nlQ80XC3 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp6nlQ80XC3 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp6nlQ80XC3 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC15.11■□□□□ 0.01
Usp6nlQ80XC3 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp6nlQ80XC3 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Usp6nlQ80XC3 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Usp6nlQ80XC3 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp6nlQ80XC3 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Usp6nlQ80XC3 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp6nlQ80XC3 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Usp6nlQ80XC3 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp6nlQ80XC3 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Usp6nlQ80XC3 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp6nlQ80XC3 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp6nlQ80XC3 Gm9755-201ENSMUST00000032981 1356 ntBASIC15.11■□□□□ 0.01
Usp6nlQ80XC3 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp6nlQ80XC3 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Usp6nlQ80XC3 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.1■□□□□ 0.01
Usp6nlQ80XC3 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Usp6nlQ80XC3 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Usp6nlQ80XC3 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Usp6nlQ80XC3 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Usp6nlQ80XC3 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Usp6nlQ80XC3 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Usp6nlQ80XC3 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Usp6nlQ80XC3 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Usp6nlQ80XC3 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Usp6nlQ80XC3 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Usp6nlQ80XC3 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Usp6nlQ80XC3 Gm22018-201ENSMUST00000104357 131 ntBASIC15.1■□□□□ 0.01
Usp6nlQ80XC3 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Usp6nlQ80XC3 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Usp6nlQ80XC3 Gm42929-201ENSMUST00000198374 1286 ntBASIC15.1■□□□□ 0.01
Usp6nlQ80XC3 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Usp6nlQ80XC3 Gm18934-201ENSMUST00000216671 1044 ntBASIC15.1■□□□□ 0.01
Usp6nlQ80XC3 AC131997.1-201ENSMUST00000228611 1229 ntBASIC15.1■□□□□ 0.01
Usp6nlQ80XC3 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Usp6nlQ80XC3 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Usp6nlQ80XC3 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Usp6nlQ80XC3 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Usp6nlQ80XC3 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Usp6nlQ80XC3 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Usp6nlQ80XC3 Zkscan14-203ENSMUST00000198959 2243 ntBASIC15.1■□□□□ 0.01
Usp6nlQ80XC3 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Usp6nlQ80XC3 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Usp6nlQ80XC3 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Usp6nlQ80XC3 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC15.1■□□□□ 0.01
Usp6nlQ80XC3 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC15.1■□□□□ 0.01
Usp6nlQ80XC3 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.1■□□□□ 0.01
Usp6nlQ80XC3 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Usp6nlQ80XC3 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.09■□□□□ 0.01
Usp6nlQ80XC3 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Usp6nlQ80XC3 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Usp6nlQ80XC3 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Usp6nlQ80XC3 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Usp6nlQ80XC3 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Usp6nlQ80XC3 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Usp6nlQ80XC3 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Usp6nlQ80XC3 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Usp6nlQ80XC3 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Usp6nlQ80XC3 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Usp6nlQ80XC3 Gm12537-201ENSMUST00000119266 1002 ntBASIC15.09■□□□□ 0.01
Usp6nlQ80XC3 Gm12070-201ENSMUST00000119551 1002 ntBASIC15.09■□□□□ 0.01
Usp6nlQ80XC3 Gm12671-201ENSMUST00000119978 1002 ntBASIC15.09■□□□□ 0.01
Usp6nlQ80XC3 Gm13292-201ENSMUST00000120014 1000 ntBASIC15.09■□□□□ 0.01
Usp6nlQ80XC3 Gm11400-201ENSMUST00000120853 1214 ntBASIC15.09■□□□□ 0.01
Usp6nlQ80XC3 Gm12403-201ENSMUST00000121384 959 ntBASIC15.09■□□□□ 0.01
Usp6nlQ80XC3 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Usp6nlQ80XC3 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Usp6nlQ80XC3 Gm10359-201ENSMUST00000180167 1002 ntBASIC15.09■□□□□ 0.01
Usp6nlQ80XC3 Gm12033-201ENSMUST00000180654 1002 ntBASIC15.09■□□□□ 0.01
Usp6nlQ80XC3 Gm5559-201ENSMUST00000180755 1002 ntBASIC15.09■□□□□ 0.01
Usp6nlQ80XC3 Gm4335-201ENSMUST00000182581 1004 ntBASIC15.09■□□□□ 0.01
Usp6nlQ80XC3 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC15.09■□□□□ 0.01
Usp6nlQ80XC3 Mir8109-201ENSMUST00000184375 117 ntBASIC15.09■□□□□ 0.01
Usp6nlQ80XC3 Gm38002-201ENSMUST00000193255 180 ntBASIC15.09■□□□□ 0.01
Usp6nlQ80XC3 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC15.09■□□□□ 0.01
Usp6nlQ80XC3 Gm17823-201ENSMUST00000217830 1006 ntBASIC15.09■□□□□ 0.01
Usp6nlQ80XC3 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Usp6nlQ80XC3 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC15.09■□□□□ 0.01
Usp6nlQ80XC3 Rn7sk-201ENSMUST00000083103 331 ntBASIC15.09■□□□□ 0.01
Usp6nlQ80XC3 Gm26315-201ENSMUST00000083890 321 ntBASIC15.09■□□□□ 0.01
Usp6nlQ80XC3 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Usp6nlQ80XC3 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Usp6nlQ80XC3 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Usp6nlQ80XC3 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Usp6nlQ80XC3 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Usp6nlQ80XC3 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Usp6nlQ80XC3 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC15.09■□□□□ 0.01
Usp6nlQ80XC3 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Usp6nlQ80XC3 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Usp6nlQ80XC3 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Usp6nlQ80XC3 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Usp6nlQ80XC3 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms