Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc116Q80X53 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc116Q80X53 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc116Q80X53 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc116Q80X53 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc116Q80X53 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc116Q80X53 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Ccdc116Q80X53 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc116Q80X53 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc116Q80X53 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc116Q80X53 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc116Q80X53 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.46□□□□□ -0.25
Ccdc116Q80X53 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc116Q80X53 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.46□□□□□ -0.25
Ccdc116Q80X53 Gm13385-201ENSMUST00000121089 220 ntBASIC13.46□□□□□ -0.25
Ccdc116Q80X53 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc116Q80X53 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Ccdc116Q80X53 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc116Q80X53 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.46□□□□□ -0.25
Ccdc116Q80X53 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.46□□□□□ -0.25
Ccdc116Q80X53 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.46□□□□□ -0.25
Ccdc116Q80X53 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Ccdc116Q80X53 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Ccdc116Q80X53 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc116Q80X53 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc116Q80X53 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc116Q80X53 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc116Q80X53 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc116Q80X53 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc116Q80X53 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc116Q80X53 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc116Q80X53 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.46□□□□□ -0.26
Ccdc116Q80X53 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ccdc116Q80X53 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ccdc116Q80X53 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.46□□□□□ -0.26
Ccdc116Q80X53 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ccdc116Q80X53 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ccdc116Q80X53 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Ccdc116Q80X53 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc116Q80X53 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.45□□□□□ -0.26
Ccdc116Q80X53 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc116Q80X53 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc116Q80X53 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Ccdc116Q80X53 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Ccdc116Q80X53 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.45□□□□□ -0.26
Ccdc116Q80X53 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.45□□□□□ -0.26
Ccdc116Q80X53 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc116Q80X53 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
Ccdc116Q80X53 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc116Q80X53 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Ccdc116Q80X53 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc116Q80X53 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.45□□□□□ -0.26
Ccdc116Q80X53 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.45□□□□□ -0.26
Ccdc116Q80X53 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc116Q80X53 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Ccdc116Q80X53 Gm27430-201ENSMUST00000184585 107 ntBASIC13.45□□□□□ -0.26
Ccdc116Q80X53 Gm10766-202ENSMUST00000194123 606 ntBASIC13.45□□□□□ -0.26
Ccdc116Q80X53 Gm44333-201ENSMUST00000197168 107 ntBASIC13.45□□□□□ -0.26
Ccdc116Q80X53 AC153961.1-201ENSMUST00000217760 385 ntBASIC13.45□□□□□ -0.26
Ccdc116Q80X53 Gm7775-201ENSMUST00000218871 853 ntBASIC13.45□□□□□ -0.26
Ccdc116Q80X53 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.45□□□□□ -0.26
Ccdc116Q80X53 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc116Q80X53 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Ccdc116Q80X53 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.45□□□□□ -0.26
Ccdc116Q80X53 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc116Q80X53 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc116Q80X53 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc116Q80X53 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc116Q80X53 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc116Q80X53 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc116Q80X53 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.45□□□□□ -0.26
Ccdc116Q80X53 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc116Q80X53 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc116Q80X53 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc116Q80X53 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.45□□□□□ -0.26
Ccdc116Q80X53 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc116Q80X53 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc116Q80X53 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc116Q80X53 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc116Q80X53 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.44□□□□□ -0.26
Ccdc116Q80X53 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc116Q80X53 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.44□□□□□ -0.26
Ccdc116Q80X53 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc116Q80X53 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc116Q80X53 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc116Q80X53 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc116Q80X53 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Ccdc116Q80X53 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Ccdc116Q80X53 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Ccdc116Q80X53 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc116Q80X53 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Ccdc116Q80X53 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc116Q80X53 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc116Q80X53 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.44□□□□□ -0.26
Ccdc116Q80X53 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC13.44□□□□□ -0.26
Ccdc116Q80X53 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc116Q80X53 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.44□□□□□ -0.26
Ccdc116Q80X53 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.44□□□□□ -0.26
Ccdc116Q80X53 Gm9063-201ENSMUST00000223299 582 ntBASIC13.44□□□□□ -0.26
Ccdc116Q80X53 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms