Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC15.83■□□□□ 0.12
Prpf40bQ80W14 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf40bQ80W14 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf40bQ80W14 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Prpf40bQ80W14 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf40bQ80W14 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf40bQ80W14 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf40bQ80W14 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf40bQ80W14 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC15.82■□□□□ 0.12
Prpf40bQ80W14 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Prpf40bQ80W14 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf40bQ80W14 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf40bQ80W14 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Prpf40bQ80W14 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC15.82■□□□□ 0.12
Prpf40bQ80W14 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf40bQ80W14 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC15.82■□□□□ 0.12
Prpf40bQ80W14 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf40bQ80W14 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf40bQ80W14 CT485787.1-201ENSMUST00000225617 968 ntBASIC15.82■□□□□ 0.12
Prpf40bQ80W14 AC126253.1-201ENSMUST00000227974 824 ntBASIC15.82■□□□□ 0.12
Prpf40bQ80W14 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf40bQ80W14 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf40bQ80W14 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf40bQ80W14 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf40bQ80W14 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf40bQ80W14 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf40bQ80W14 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf40bQ80W14 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf40bQ80W14 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf40bQ80W14 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Prpf40bQ80W14 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf40bQ80W14 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Prpf40bQ80W14 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf40bQ80W14 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf40bQ80W14 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf40bQ80W14 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf40bQ80W14 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf40bQ80W14 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf40bQ80W14 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf40bQ80W14 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf40bQ80W14 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Prpf40bQ80W14 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf40bQ80W14 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Prpf40bQ80W14 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf40bQ80W14 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf40bQ80W14 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Prpf40bQ80W14 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf40bQ80W14 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf40bQ80W14 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf40bQ80W14 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
Prpf40bQ80W14 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf40bQ80W14 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC15.81■□□□□ 0.12
Prpf40bQ80W14 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC15.81■□□□□ 0.12
Prpf40bQ80W14 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC15.81■□□□□ 0.12
Prpf40bQ80W14 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC15.81■□□□□ 0.12
Prpf40bQ80W14 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC15.81■□□□□ 0.12
Prpf40bQ80W14 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf40bQ80W14 Gm8775-201ENSMUST00000170943 1327 ntBASIC15.81■□□□□ 0.12
Prpf40bQ80W14 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
Prpf40bQ80W14 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Prpf40bQ80W14 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC15.81■□□□□ 0.12
Prpf40bQ80W14 Gm5370-201ENSMUST00000187187 574 ntBASIC15.81■□□□□ 0.12
Prpf40bQ80W14 Gm21470-201ENSMUST00000187680 696 ntBASIC15.81■□□□□ 0.12
Prpf40bQ80W14 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC15.81■□□□□ 0.12
Prpf40bQ80W14 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf40bQ80W14 Gm7619-201ENSMUST00000210649 1282 ntBASIC15.81■□□□□ 0.12
Prpf40bQ80W14 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf40bQ80W14 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC15.81■□□□□ 0.12
Prpf40bQ80W14 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf40bQ80W14 AC159747.1-201ENSMUST00000219903 265 ntBASIC15.81■□□□□ 0.12
Prpf40bQ80W14 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
Prpf40bQ80W14 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf40bQ80W14 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC15.81■□□□□ 0.12
Prpf40bQ80W14 AC154806.6-201ENSMUST00000228192 202 ntBASIC15.81■□□□□ 0.12
Prpf40bQ80W14 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf40bQ80W14 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf40bQ80W14 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf40bQ80W14 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf40bQ80W14 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf40bQ80W14 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf40bQ80W14 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf40bQ80W14 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf40bQ80W14 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Prpf40bQ80W14 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf40bQ80W14 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Prpf40bQ80W14 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Prpf40bQ80W14 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf40bQ80W14 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf40bQ80W14 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf40bQ80W14 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf40bQ80W14 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Prpf40bQ80W14 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf40bQ80W14 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf40bQ80W14 Dctn4-202ENSMUST00000223590 1530 ntBASIC15.8■□□□□ 0.12
Prpf40bQ80W14 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf40bQ80W14 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf40bQ80W14 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf40bQ80W14 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf40bQ80W14 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC15.8■□□□□ 0.12
Prpf40bQ80W14 Gm23931-201ENSMUST00000103842 109 ntBASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms