Protein–RNA interactions for Protein: Q80V63

Prdm4, PR domain zinc finger protein 4, mousemouse

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm4Q80V63 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prdm4Q80V63 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.3□□□□□ -0.12
Prdm4Q80V63 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prdm4Q80V63 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Prdm4Q80V63 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prdm4Q80V63 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC14.3□□□□□ -0.12
Prdm4Q80V63 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prdm4Q80V63 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prdm4Q80V63 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Prdm4Q80V63 Gm37269-201ENSMUST00000193906 1891 ntBASIC14.3□□□□□ -0.12
Prdm4Q80V63 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Prdm4Q80V63 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Prdm4Q80V63 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Prdm4Q80V63 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.3□□□□□ -0.12
Prdm4Q80V63 Gm13597-201ENSMUST00000121239 375 ntBASIC14.3□□□□□ -0.12
Prdm4Q80V63 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prdm4Q80V63 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prdm4Q80V63 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prdm4Q80V63 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Prdm4Q80V63 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prdm4Q80V63 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prdm4Q80V63 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Prdm4Q80V63 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prdm4Q80V63 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prdm4Q80V63 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prdm4Q80V63 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prdm4Q80V63 Rnf17-202ENSMUST00000223627 2077 ntBASIC14.3□□□□□ -0.12
Prdm4Q80V63 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Prdm4Q80V63 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.3□□□□□ -0.12
Prdm4Q80V63 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Prdm4Q80V63 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prdm4Q80V63 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prdm4Q80V63 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prdm4Q80V63 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Prdm4Q80V63 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prdm4Q80V63 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Prdm4Q80V63 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.3□□□□□ -0.12
Prdm4Q80V63 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prdm4Q80V63 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prdm4Q80V63 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prdm4Q80V63 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Prdm4Q80V63 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prdm4Q80V63 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prdm4Q80V63 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC14.29□□□□□ -0.12
Prdm4Q80V63 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prdm4Q80V63 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prdm4Q80V63 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prdm4Q80V63 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Prdm4Q80V63 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prdm4Q80V63 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prdm4Q80V63 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC14.29□□□□□ -0.12
Prdm4Q80V63 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prdm4Q80V63 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prdm4Q80V63 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prdm4Q80V63 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prdm4Q80V63 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prdm4Q80V63 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prdm4Q80V63 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.29□□□□□ -0.12
Prdm4Q80V63 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.29□□□□□ -0.12
Prdm4Q80V63 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prdm4Q80V63 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prdm4Q80V63 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prdm4Q80V63 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prdm4Q80V63 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prdm4Q80V63 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prdm4Q80V63 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prdm4Q80V63 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Prdm4Q80V63 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prdm4Q80V63 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prdm4Q80V63 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prdm4Q80V63 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prdm4Q80V63 Rab3c-202ENSMUST00000223922 2398 ntBASIC14.29□□□□□ -0.12
Prdm4Q80V63 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Prdm4Q80V63 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Prdm4Q80V63 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.28□□□□□ -0.12
Prdm4Q80V63 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Prdm4Q80V63 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Prdm4Q80V63 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prdm4Q80V63 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prdm4Q80V63 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prdm4Q80V63 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.28□□□□□ -0.12
Prdm4Q80V63 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.28□□□□□ -0.12
Prdm4Q80V63 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.28□□□□□ -0.12
Prdm4Q80V63 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Prdm4Q80V63 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC14.28□□□□□ -0.12
Prdm4Q80V63 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.28□□□□□ -0.12
Prdm4Q80V63 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC14.28□□□□□ -0.12
Prdm4Q80V63 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prdm4Q80V63 Gm10686-201ENSMUST00000215389 3247 ntBASIC14.28□□□□□ -0.12
Prdm4Q80V63 Gm18636-201ENSMUST00000218846 1066 ntBASIC14.28□□□□□ -0.12
Prdm4Q80V63 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prdm4Q80V63 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Prdm4Q80V63 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Prdm4Q80V63 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Prdm4Q80V63 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prdm4Q80V63 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prdm4Q80V63 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prdm4Q80V63 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.28□□□□□ -0.12
Prdm4Q80V63 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Prdm4Q80V63 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms