Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Prpf38bQ80SY5 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Prpf38bQ80SY5 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Prpf38bQ80SY5 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Prpf38bQ80SY5 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Prpf38bQ80SY5 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Prpf38bQ80SY5 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Prpf38bQ80SY5 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.39□□□□□ -0.11
Prpf38bQ80SY5 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Prpf38bQ80SY5 Gm18307-201ENSMUST00000206864 949 ntBASIC14.39□□□□□ -0.11
Prpf38bQ80SY5 Gm18056-201ENSMUST00000207670 568 ntBASIC14.39□□□□□ -0.11
Prpf38bQ80SY5 Gm18061-201ENSMUST00000208350 562 ntBASIC14.39□□□□□ -0.11
Prpf38bQ80SY5 Gm18063-201ENSMUST00000208529 568 ntBASIC14.39□□□□□ -0.11
Prpf38bQ80SY5 Gm18052-201ENSMUST00000208750 559 ntBASIC14.39□□□□□ -0.11
Prpf38bQ80SY5 AC154276.1-201ENSMUST00000228874 1299 ntBASIC14.39□□□□□ -0.11
Prpf38bQ80SY5 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Prpf38bQ80SY5 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Prpf38bQ80SY5 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Prpf38bQ80SY5 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Prpf38bQ80SY5 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Prpf38bQ80SY5 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Prpf38bQ80SY5 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Prpf38bQ80SY5 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Prpf38bQ80SY5 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.39□□□□□ -0.11
Prpf38bQ80SY5 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.39□□□□□ -0.11
Prpf38bQ80SY5 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Prpf38bQ80SY5 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.39□□□□□ -0.11
Prpf38bQ80SY5 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Prpf38bQ80SY5 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Prpf38bQ80SY5 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Prpf38bQ80SY5 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Prpf38bQ80SY5 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf38bQ80SY5 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf38bQ80SY5 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf38bQ80SY5 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf38bQ80SY5 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf38bQ80SY5 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf38bQ80SY5 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf38bQ80SY5 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Prpf38bQ80SY5 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf38bQ80SY5 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf38bQ80SY5 Gm43068-201ENSMUST00000201095 1273 ntBASIC14.38□□□□□ -0.11
Prpf38bQ80SY5 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14.38□□□□□ -0.11
Prpf38bQ80SY5 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf38bQ80SY5 Gm9182-201ENSMUST00000217829 639 ntBASIC14.38□□□□□ -0.11
Prpf38bQ80SY5 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.38□□□□□ -0.11
Prpf38bQ80SY5 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Prpf38bQ80SY5 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Prpf38bQ80SY5 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf38bQ80SY5 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf38bQ80SY5 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf38bQ80SY5 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf38bQ80SY5 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf38bQ80SY5 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf38bQ80SY5 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Prpf38bQ80SY5 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf38bQ80SY5 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
Prpf38bQ80SY5 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf38bQ80SY5 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf38bQ80SY5 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Prpf38bQ80SY5 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.38□□□□□ -0.11
Prpf38bQ80SY5 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.37□□□□□ -0.11
Prpf38bQ80SY5 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf38bQ80SY5 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.37□□□□□ -0.11
Prpf38bQ80SY5 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf38bQ80SY5 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf38bQ80SY5 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf38bQ80SY5 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf38bQ80SY5 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf38bQ80SY5 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf38bQ80SY5 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf38bQ80SY5 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf38bQ80SY5 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.37□□□□□ -0.11
Prpf38bQ80SY5 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf38bQ80SY5 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf38bQ80SY5 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf38bQ80SY5 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf38bQ80SY5 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf38bQ80SY5 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Prpf38bQ80SY5 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf38bQ80SY5 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Prpf38bQ80SY5 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC14.37□□□□□ -0.11
Prpf38bQ80SY5 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC14.37□□□□□ -0.11
Prpf38bQ80SY5 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC14.37□□□□□ -0.11
Prpf38bQ80SY5 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf38bQ80SY5 Gm27572-201ENSMUST00000183702 255 ntBASIC14.37□□□□□ -0.11
Prpf38bQ80SY5 Gm38241-201ENSMUST00000192641 898 ntBASIC14.37□□□□□ -0.11
Prpf38bQ80SY5 Gm4857-201ENSMUST00000192718 785 ntBASIC14.37□□□□□ -0.11
Prpf38bQ80SY5 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf38bQ80SY5 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf38bQ80SY5 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf38bQ80SY5 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf38bQ80SY5 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf38bQ80SY5 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf38bQ80SY5 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf38bQ80SY5 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf38bQ80SY5 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf38bQ80SY5 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf38bQ80SY5 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf38bQ80SY5 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms