Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Pcdh8Q7TSK3 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh8Q7TSK3 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Pcdh8Q7TSK3 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdh8Q7TSK3 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh8Q7TSK3 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh8Q7TSK3 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh8Q7TSK3 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.54□□□□□ -0.24
Pcdh8Q7TSK3 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Pcdh8Q7TSK3 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Pcdh8Q7TSK3 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh8Q7TSK3 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.54□□□□□ -0.24
Pcdh8Q7TSK3 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh8Q7TSK3 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh8Q7TSK3 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh8Q7TSK3 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Pcdh8Q7TSK3 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh8Q7TSK3 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.54□□□□□ -0.24
Pcdh8Q7TSK3 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh8Q7TSK3 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.54□□□□□ -0.24
Pcdh8Q7TSK3 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.54□□□□□ -0.24
Pcdh8Q7TSK3 Gm24420-201ENSMUST00000176676 59 ntBASIC13.54□□□□□ -0.24
Pcdh8Q7TSK3 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh8Q7TSK3 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.54□□□□□ -0.24
Pcdh8Q7TSK3 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
Pcdh8Q7TSK3 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh8Q7TSK3 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Pcdh8Q7TSK3 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh8Q7TSK3 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh8Q7TSK3 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh8Q7TSK3 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh8Q7TSK3 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh8Q7TSK3 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh8Q7TSK3 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh8Q7TSK3 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh8Q7TSK3 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Pcdh8Q7TSK3 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh8Q7TSK3 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdh8Q7TSK3 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.54□□□□□ -0.24
Pcdh8Q7TSK3 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh8Q7TSK3 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Pcdh8Q7TSK3 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh8Q7TSK3 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Pcdh8Q7TSK3 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh8Q7TSK3 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh8Q7TSK3 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh8Q7TSK3 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh8Q7TSK3 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh8Q7TSK3 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh8Q7TSK3 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh8Q7TSK3 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh8Q7TSK3 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh8Q7TSK3 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Pcdh8Q7TSK3 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh8Q7TSK3 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh8Q7TSK3 Gm15678-201ENSMUST00000117573 960 ntBASIC13.53□□□□□ -0.24
Pcdh8Q7TSK3 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.53□□□□□ -0.24
Pcdh8Q7TSK3 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh8Q7TSK3 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.53□□□□□ -0.24
Pcdh8Q7TSK3 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC13.53□□□□□ -0.24
Pcdh8Q7TSK3 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.53□□□□□ -0.24
Pcdh8Q7TSK3 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh8Q7TSK3 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Pcdh8Q7TSK3 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh8Q7TSK3 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh8Q7TSK3 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Pcdh8Q7TSK3 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.53□□□□□ -0.24
Pcdh8Q7TSK3 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Pcdh8Q7TSK3 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh8Q7TSK3 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh8Q7TSK3 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh8Q7TSK3 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdh8Q7TSK3 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Pcdh8Q7TSK3 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdh8Q7TSK3 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdh8Q7TSK3 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Pcdh8Q7TSK3 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdh8Q7TSK3 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
Pcdh8Q7TSK3 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdh8Q7TSK3 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdh8Q7TSK3 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdh8Q7TSK3 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdh8Q7TSK3 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdh8Q7TSK3 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdh8Q7TSK3 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdh8Q7TSK3 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdh8Q7TSK3 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdh8Q7TSK3 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdh8Q7TSK3 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh8Q7TSK3 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Pcdh8Q7TSK3 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.52□□□□□ -0.25
Pcdh8Q7TSK3 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh8Q7TSK3 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.52□□□□□ -0.25
Pcdh8Q7TSK3 Gm43094-201ENSMUST00000196549 921 ntBASIC13.52□□□□□ -0.25
Pcdh8Q7TSK3 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Pcdh8Q7TSK3 Gm5356-201ENSMUST00000093326 615 ntBASIC13.52□□□□□ -0.25
Pcdh8Q7TSK3 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh8Q7TSK3 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh8Q7TSK3 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh8Q7TSK3 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms