Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.83□□□□□ -0.2
Rad54bQ6PFE3 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rad54bQ6PFE3 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rad54bQ6PFE3 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rad54bQ6PFE3 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rad54bQ6PFE3 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rad54bQ6PFE3 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rad54bQ6PFE3 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rad54bQ6PFE3 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.83□□□□□ -0.2
Rad54bQ6PFE3 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rad54bQ6PFE3 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rad54bQ6PFE3 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rad54bQ6PFE3 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rad54bQ6PFE3 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rad54bQ6PFE3 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rad54bQ6PFE3 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rad54bQ6PFE3 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rad54bQ6PFE3 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rad54bQ6PFE3 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.82□□□□□ -0.2
Rad54bQ6PFE3 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.82□□□□□ -0.2
Rad54bQ6PFE3 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rad54bQ6PFE3 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rad54bQ6PFE3 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rad54bQ6PFE3 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rad54bQ6PFE3 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rad54bQ6PFE3 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.82□□□□□ -0.2
Rad54bQ6PFE3 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rad54bQ6PFE3 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rad54bQ6PFE3 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rad54bQ6PFE3 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rad54bQ6PFE3 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rad54bQ6PFE3 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rad54bQ6PFE3 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rad54bQ6PFE3 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rad54bQ6PFE3 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.82□□□□□ -0.2
Rad54bQ6PFE3 Gm13385-201ENSMUST00000121089 220 ntBASIC13.82□□□□□ -0.2
Rad54bQ6PFE3 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.82□□□□□ -0.2
Rad54bQ6PFE3 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.82□□□□□ -0.2
Rad54bQ6PFE3 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Rad54bQ6PFE3 Gm8927-201ENSMUST00000181978 981 ntBASIC13.82□□□□□ -0.2
Rad54bQ6PFE3 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rad54bQ6PFE3 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rad54bQ6PFE3 Gm3222-201ENSMUST00000071282 990 ntBASIC13.82□□□□□ -0.2
Rad54bQ6PFE3 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rad54bQ6PFE3 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.82□□□□□ -0.2
Rad54bQ6PFE3 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rad54bQ6PFE3 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.82□□□□□ -0.2
Rad54bQ6PFE3 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Rad54bQ6PFE3 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rad54bQ6PFE3 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rad54bQ6PFE3 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.82□□□□□ -0.2
Rad54bQ6PFE3 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rad54bQ6PFE3 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rad54bQ6PFE3 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rad54bQ6PFE3 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rad54bQ6PFE3 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rad54bQ6PFE3 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rad54bQ6PFE3 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rad54bQ6PFE3 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rad54bQ6PFE3 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Rad54bQ6PFE3 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rad54bQ6PFE3 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rad54bQ6PFE3 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Rad54bQ6PFE3 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rad54bQ6PFE3 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Rad54bQ6PFE3 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rad54bQ6PFE3 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rad54bQ6PFE3 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rad54bQ6PFE3 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Rad54bQ6PFE3 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rad54bQ6PFE3 Syt7-205ENSMUST00000224135 1557 ntBASIC13.81□□□□□ -0.2
Rad54bQ6PFE3 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.81□□□□□ -0.2
Rad54bQ6PFE3 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rad54bQ6PFE3 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.81□□□□□ -0.2
Rad54bQ6PFE3 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rad54bQ6PFE3 Gm4804-201ENSMUST00000182234 999 ntBASIC13.81□□□□□ -0.2
Rad54bQ6PFE3 Gm44771-201ENSMUST00000206975 626 ntBASIC13.81□□□□□ -0.2
Rad54bQ6PFE3 Gm9229-201ENSMUST00000222777 126 ntBASIC13.81□□□□□ -0.2
Rad54bQ6PFE3 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rad54bQ6PFE3 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Rad54bQ6PFE3 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Rad54bQ6PFE3 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.81□□□□□ -0.2
Rad54bQ6PFE3 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rad54bQ6PFE3 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rad54bQ6PFE3 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rad54bQ6PFE3 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rad54bQ6PFE3 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rad54bQ6PFE3 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rad54bQ6PFE3 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.81□□□□□ -0.2
Rad54bQ6PFE3 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rad54bQ6PFE3 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.81□□□□□ -0.2
Rad54bQ6PFE3 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rad54bQ6PFE3 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rad54bQ6PFE3 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Rad54bQ6PFE3 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rad54bQ6PFE3 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rad54bQ6PFE3 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Rad54bQ6PFE3 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rad54bQ6PFE3 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Rad54bQ6PFE3 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms