Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nup98Q6PFD9 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nup98Q6PFD9 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Nup98Q6PFD9 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC15.9■□□□□ 0.14
Nup98Q6PFD9 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Nup98Q6PFD9 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.14
Nup98Q6PFD9 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC15.89■□□□□ 0.14
Nup98Q6PFD9 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.14
Nup98Q6PFD9 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Nup98Q6PFD9 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
Nup98Q6PFD9 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC15.89■□□□□ 0.13
Nup98Q6PFD9 Gm7046-201ENSMUST00000221351 977 ntBASIC15.89■□□□□ 0.13
Nup98Q6PFD9 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC15.89■□□□□ 0.13
Nup98Q6PFD9 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nup98Q6PFD9 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Nup98Q6PFD9 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Nup98Q6PFD9 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC15.89■□□□□ 0.13
Nup98Q6PFD9 Gm43579-201ENSMUST00000202387 1307 ntBASIC15.89■□□□□ 0.13
Nup98Q6PFD9 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Nup98Q6PFD9 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC15.89■□□□□ 0.13
Nup98Q6PFD9 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Nup98Q6PFD9 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nup98Q6PFD9 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nup98Q6PFD9 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nup98Q6PFD9 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nup98Q6PFD9 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nup98Q6PFD9 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nup98Q6PFD9 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Nup98Q6PFD9 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nup98Q6PFD9 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Nup98Q6PFD9 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nup98Q6PFD9 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nup98Q6PFD9 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Nup98Q6PFD9 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nup98Q6PFD9 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.89■□□□□ 0.13
Nup98Q6PFD9 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Nup98Q6PFD9 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC15.89■□□□□ 0.13
Nup98Q6PFD9 Gm12241-201ENSMUST00000118330 726 ntBASIC15.89■□□□□ 0.13
Nup98Q6PFD9 Gm2231-201ENSMUST00000125661 612 ntBASIC15.89■□□□□ 0.13
Nup98Q6PFD9 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC15.89■□□□□ 0.13
Nup98Q6PFD9 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Nup98Q6PFD9 Gm6458-201ENSMUST00000211573 635 ntBASIC15.89■□□□□ 0.13
Nup98Q6PFD9 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC15.89■□□□□ 0.13
Nup98Q6PFD9 Gm32025-201ENSMUST00000217960 307 ntBASIC15.89■□□□□ 0.13
Nup98Q6PFD9 AC132384.14-201ENSMUST00000219346 1147 ntBASIC15.89■□□□□ 0.13
Nup98Q6PFD9 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nup98Q6PFD9 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Nup98Q6PFD9 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Nup98Q6PFD9 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nup98Q6PFD9 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nup98Q6PFD9 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Nup98Q6PFD9 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nup98Q6PFD9 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nup98Q6PFD9 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nup98Q6PFD9 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.88■□□□□ 0.13
Nup98Q6PFD9 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nup98Q6PFD9 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nup98Q6PFD9 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nup98Q6PFD9 Gm8805-201ENSMUST00000117848 313 ntBASIC15.88■□□□□ 0.13
Nup98Q6PFD9 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC15.88■□□□□ 0.13
Nup98Q6PFD9 Gm24548-201ENSMUST00000158650 108 ntBASIC15.88■□□□□ 0.13
Nup98Q6PFD9 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Nup98Q6PFD9 Gm45865-201ENSMUST00000211815 945 ntBASIC15.88■□□□□ 0.13
Nup98Q6PFD9 AC166051.1-201ENSMUST00000214313 210 ntBASIC15.88■□□□□ 0.13
Nup98Q6PFD9 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nup98Q6PFD9 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Nup98Q6PFD9 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nup98Q6PFD9 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Nup98Q6PFD9 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nup98Q6PFD9 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nup98Q6PFD9 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nup98Q6PFD9 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Nup98Q6PFD9 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nup98Q6PFD9 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nup98Q6PFD9 Gm12626-201ENSMUST00000117339 1983 ntBASIC15.88■□□□□ 0.13
Nup98Q6PFD9 Gm12623-201ENSMUST00000119849 1983 ntBASIC15.88■□□□□ 0.13
Nup98Q6PFD9 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nup98Q6PFD9 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nup98Q6PFD9 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nup98Q6PFD9 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Nup98Q6PFD9 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nup98Q6PFD9 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nup98Q6PFD9 Gm22323-201ENSMUST00000103832 109 ntBASIC15.87■□□□□ 0.13
Nup98Q6PFD9 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC15.87■□□□□ 0.13
Nup98Q6PFD9 Gm12329-201ENSMUST00000120829 1007 ntBASIC15.87■□□□□ 0.13
Nup98Q6PFD9 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC15.87■□□□□ 0.13
Nup98Q6PFD9 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Nup98Q6PFD9 Gm6621-201ENSMUST00000193251 772 ntBASIC15.87■□□□□ 0.13
Nup98Q6PFD9 Gm18935-201ENSMUST00000212692 664 ntBASIC15.87■□□□□ 0.13
Nup98Q6PFD9 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
Nup98Q6PFD9 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nup98Q6PFD9 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nup98Q6PFD9 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC15.87■□□□□ 0.13
Nup98Q6PFD9 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nup98Q6PFD9 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nup98Q6PFD9 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nup98Q6PFD9 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nup98Q6PFD9 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Nup98Q6PFD9 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Nup98Q6PFD9 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms