Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smarcc2Q6PDG5 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smarcc2Q6PDG5 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smarcc2Q6PDG5 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smarcc2Q6PDG5 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC16.01■□□□□ 0.15
Smarcc2Q6PDG5 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smarcc2Q6PDG5 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smarcc2Q6PDG5 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smarcc2Q6PDG5 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Smarcc2Q6PDG5 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC16■□□□□ 0.15
Smarcc2Q6PDG5 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC16■□□□□ 0.15
Smarcc2Q6PDG5 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smarcc2Q6PDG5 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC16■□□□□ 0.15
Smarcc2Q6PDG5 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smarcc2Q6PDG5 AC154262.2-201ENSMUST00000224310 2293 ntBASIC16■□□□□ 0.15
Smarcc2Q6PDG5 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC16■□□□□ 0.15
Smarcc2Q6PDG5 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Smarcc2Q6PDG5 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smarcc2Q6PDG5 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Smarcc2Q6PDG5 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC16■□□□□ 0.15
Smarcc2Q6PDG5 Gm7488-201ENSMUST00000117148 684 ntBASIC16■□□□□ 0.15
Smarcc2Q6PDG5 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC16■□□□□ 0.15
Smarcc2Q6PDG5 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
Smarcc2Q6PDG5 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC16■□□□□ 0.15
Smarcc2Q6PDG5 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC16■□□□□ 0.15
Smarcc2Q6PDG5 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC16■□□□□ 0.15
Smarcc2Q6PDG5 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smarcc2Q6PDG5 Gm6218-201ENSMUST00000219812 628 ntBASIC16■□□□□ 0.15
Smarcc2Q6PDG5 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC16■□□□□ 0.15
Smarcc2Q6PDG5 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Smarcc2Q6PDG5 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC16■□□□□ 0.15
Smarcc2Q6PDG5 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Smarcc2Q6PDG5 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smarcc2Q6PDG5 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smarcc2Q6PDG5 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC16■□□□□ 0.15
Smarcc2Q6PDG5 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Smarcc2Q6PDG5 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Smarcc2Q6PDG5 AC139054.1-201ENSMUST00000226898 1598 ntBASIC16■□□□□ 0.15
Smarcc2Q6PDG5 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smarcc2Q6PDG5 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC16■□□□□ 0.15
Smarcc2Q6PDG5 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smarcc2Q6PDG5 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smarcc2Q6PDG5 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Smarcc2Q6PDG5 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smarcc2Q6PDG5 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smarcc2Q6PDG5 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Smarcc2Q6PDG5 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smarcc2Q6PDG5 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC15.99■□□□□ 0.15
Smarcc2Q6PDG5 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smarcc2Q6PDG5 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smarcc2Q6PDG5 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Smarcc2Q6PDG5 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Smarcc2Q6PDG5 Gm11557-201ENSMUST00000120200 1008 ntBASIC15.99■□□□□ 0.15
Smarcc2Q6PDG5 Gm13385-201ENSMUST00000121089 220 ntBASIC15.99■□□□□ 0.15
Smarcc2Q6PDG5 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Smarcc2Q6PDG5 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC15.99■□□□□ 0.15
Smarcc2Q6PDG5 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC15.99■□□□□ 0.15
Smarcc2Q6PDG5 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC15.99■□□□□ 0.15
Smarcc2Q6PDG5 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smarcc2Q6PDG5 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Smarcc2Q6PDG5 Gm8927-201ENSMUST00000181978 981 ntBASIC15.99■□□□□ 0.15
Smarcc2Q6PDG5 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Smarcc2Q6PDG5 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Smarcc2Q6PDG5 AC165157.4-201ENSMUST00000220587 139 ntBASIC15.99■□□□□ 0.15
Smarcc2Q6PDG5 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smarcc2Q6PDG5 Gm3222-201ENSMUST00000071282 990 ntBASIC15.99■□□□□ 0.15
Smarcc2Q6PDG5 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Smarcc2Q6PDG5 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Smarcc2Q6PDG5 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smarcc2Q6PDG5 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smarcc2Q6PDG5 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Smarcc2Q6PDG5 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smarcc2Q6PDG5 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smarcc2Q6PDG5 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smarcc2Q6PDG5 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC15.98■□□□□ 0.15
Smarcc2Q6PDG5 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Smarcc2Q6PDG5 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smarcc2Q6PDG5 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Smarcc2Q6PDG5 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Smarcc2Q6PDG5 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smarcc2Q6PDG5 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Smarcc2Q6PDG5 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smarcc2Q6PDG5 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Smarcc2Q6PDG5 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smarcc2Q6PDG5 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Smarcc2Q6PDG5 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smarcc2Q6PDG5 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC15.98■□□□□ 0.15
Smarcc2Q6PDG5 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Smarcc2Q6PDG5 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC15.98■□□□□ 0.15
Smarcc2Q6PDG5 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC15.98■□□□□ 0.15
Smarcc2Q6PDG5 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC15.98■□□□□ 0.15
Smarcc2Q6PDG5 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC15.98■□□□□ 0.15
Smarcc2Q6PDG5 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smarcc2Q6PDG5 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smarcc2Q6PDG5 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smarcc2Q6PDG5 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smarcc2Q6PDG5 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smarcc2Q6PDG5 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smarcc2Q6PDG5 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smarcc2Q6PDG5 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms