Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcd3Q6P9Z1 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Smarcd3Q6P9Z1 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcd3Q6P9Z1 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcd3Q6P9Z1 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcd3Q6P9Z1 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcd3Q6P9Z1 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcd3Q6P9Z1 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcd3Q6P9Z1 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcd3Q6P9Z1 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcd3Q6P9Z1 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcd3Q6P9Z1 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Smarcd3Q6P9Z1 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Smarcd3Q6P9Z1 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcd3Q6P9Z1 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcd3Q6P9Z1 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.59□□□□□ -0.39
Smarcd3Q6P9Z1 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcd3Q6P9Z1 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcd3Q6P9Z1 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Smarcd3Q6P9Z1 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcd3Q6P9Z1 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcd3Q6P9Z1 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcd3Q6P9Z1 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcd3Q6P9Z1 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Smarcd3Q6P9Z1 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcd3Q6P9Z1 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcd3Q6P9Z1 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcd3Q6P9Z1 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.59□□□□□ -0.39
Smarcd3Q6P9Z1 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.59□□□□□ -0.39
Smarcd3Q6P9Z1 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcd3Q6P9Z1 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcd3Q6P9Z1 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcd3Q6P9Z1 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcd3Q6P9Z1 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Smarcd3Q6P9Z1 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcd3Q6P9Z1 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcd3Q6P9Z1 Mir1895-201ENSMUST00000122615 79 ntBASIC12.59□□□□□ -0.39
Smarcd3Q6P9Z1 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.59□□□□□ -0.39
Smarcd3Q6P9Z1 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcd3Q6P9Z1 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.59□□□□□ -0.39
Smarcd3Q6P9Z1 Gm27631-201ENSMUST00000184163 466 ntBASIC12.59□□□□□ -0.39
Smarcd3Q6P9Z1 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcd3Q6P9Z1 AC131710.1-201ENSMUST00000228336 990 ntBASIC12.59□□□□□ -0.39
Smarcd3Q6P9Z1 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcd3Q6P9Z1 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcd3Q6P9Z1 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcd3Q6P9Z1 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Smarcd3Q6P9Z1 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Smarcd3Q6P9Z1 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcd3Q6P9Z1 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.59□□□□□ -0.39
Smarcd3Q6P9Z1 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcd3Q6P9Z1 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.59□□□□□ -0.39
Smarcd3Q6P9Z1 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Smarcd3Q6P9Z1 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcd3Q6P9Z1 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Smarcd3Q6P9Z1 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.58□□□□□ -0.39
Smarcd3Q6P9Z1 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Smarcd3Q6P9Z1 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
Smarcd3Q6P9Z1 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Smarcd3Q6P9Z1 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.58□□□□□ -0.39
Smarcd3Q6P9Z1 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcd3Q6P9Z1 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcd3Q6P9Z1 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcd3Q6P9Z1 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcd3Q6P9Z1 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcd3Q6P9Z1 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcd3Q6P9Z1 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Smarcd3Q6P9Z1 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcd3Q6P9Z1 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcd3Q6P9Z1 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcd3Q6P9Z1 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcd3Q6P9Z1 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcd3Q6P9Z1 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcd3Q6P9Z1 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcd3Q6P9Z1 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcd3Q6P9Z1 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcd3Q6P9Z1 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.58□□□□□ -0.4
Smarcd3Q6P9Z1 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC12.58□□□□□ -0.4
Smarcd3Q6P9Z1 Gm13015-201ENSMUST00000118674 204 ntBASIC12.58□□□□□ -0.4
Smarcd3Q6P9Z1 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.58□□□□□ -0.4
Smarcd3Q6P9Z1 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.58□□□□□ -0.4
Smarcd3Q6P9Z1 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.58□□□□□ -0.4
Smarcd3Q6P9Z1 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcd3Q6P9Z1 Gm9824-201ENSMUST00000178707 561 ntBASIC12.58□□□□□ -0.4
Smarcd3Q6P9Z1 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.58□□□□□ -0.4
Smarcd3Q6P9Z1 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcd3Q6P9Z1 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.58□□□□□ -0.4
Smarcd3Q6P9Z1 Gm29741-201ENSMUST00000192667 421 ntBASIC12.58□□□□□ -0.4
Smarcd3Q6P9Z1 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC12.58□□□□□ -0.4
Smarcd3Q6P9Z1 Gm18027-201ENSMUST00000218947 619 ntBASIC12.58□□□□□ -0.4
Smarcd3Q6P9Z1 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcd3Q6P9Z1 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.58□□□□□ -0.4
Smarcd3Q6P9Z1 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcd3Q6P9Z1 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcd3Q6P9Z1 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcd3Q6P9Z1 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcd3Q6P9Z1 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcd3Q6P9Z1 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcd3Q6P9Z1 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.58□□□□□ -0.4
Smarcd3Q6P9Z1 Mir125a-201ENSMUST00000083545 68 ntBASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms