Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Gm18062-201ENSMUST00000208020 547 ntBASIC14.38□□□□□ -0.11
Hmgb4Q6P8W9 Gm18055-201ENSMUST00000208254 547 ntBASIC14.38□□□□□ -0.11
Hmgb4Q6P8W9 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC14.38□□□□□ -0.11
Hmgb4Q6P8W9 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.38□□□□□ -0.11
Hmgb4Q6P8W9 AC125350.2-201ENSMUST00000224737 727 ntBASIC14.38□□□□□ -0.11
Hmgb4Q6P8W9 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14.38□□□□□ -0.11
Hmgb4Q6P8W9 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgb4Q6P8W9 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Hmgb4Q6P8W9 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgb4Q6P8W9 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Hmgb4Q6P8W9 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgb4Q6P8W9 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgb4Q6P8W9 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgb4Q6P8W9 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgb4Q6P8W9 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.38□□□□□ -0.11
Hmgb4Q6P8W9 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgb4Q6P8W9 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgb4Q6P8W9 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgb4Q6P8W9 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgb4Q6P8W9 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgb4Q6P8W9 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Hmgb4Q6P8W9 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgb4Q6P8W9 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgb4Q6P8W9 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.37□□□□□ -0.11
Hmgb4Q6P8W9 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgb4Q6P8W9 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgb4Q6P8W9 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgb4Q6P8W9 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Hmgb4Q6P8W9 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Hmgb4Q6P8W9 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.37□□□□□ -0.11
Hmgb4Q6P8W9 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgb4Q6P8W9 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgb4Q6P8W9 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Hmgb4Q6P8W9 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC14.37□□□□□ -0.11
Hmgb4Q6P8W9 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC14.37□□□□□ -0.11
Hmgb4Q6P8W9 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgb4Q6P8W9 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Hmgb4Q6P8W9 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.37□□□□□ -0.11
Hmgb4Q6P8W9 Gm5035-201ENSMUST00000215581 927 ntBASIC14.37□□□□□ -0.11
Hmgb4Q6P8W9 Gm18027-201ENSMUST00000218947 619 ntBASIC14.37□□□□□ -0.11
Hmgb4Q6P8W9 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.37□□□□□ -0.11
Hmgb4Q6P8W9 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgb4Q6P8W9 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgb4Q6P8W9 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgb4Q6P8W9 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgb4Q6P8W9 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Hmgb4Q6P8W9 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgb4Q6P8W9 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.37□□□□□ -0.11
Hmgb4Q6P8W9 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgb4Q6P8W9 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgb4Q6P8W9 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgb4Q6P8W9 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgb4Q6P8W9 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgb4Q6P8W9 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgb4Q6P8W9 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Hmgb4Q6P8W9 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgb4Q6P8W9 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgb4Q6P8W9 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgb4Q6P8W9 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgb4Q6P8W9 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgb4Q6P8W9 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmgb4Q6P8W9 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Hmgb4Q6P8W9 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgb4Q6P8W9 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgb4Q6P8W9 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.36□□□□□ -0.11
Hmgb4Q6P8W9 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgb4Q6P8W9 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgb4Q6P8W9 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgb4Q6P8W9 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgb4Q6P8W9 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgb4Q6P8W9 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.36□□□□□ -0.11
Hmgb4Q6P8W9 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Hmgb4Q6P8W9 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Hmgb4Q6P8W9 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.36□□□□□ -0.11
Hmgb4Q6P8W9 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.36□□□□□ -0.11
Hmgb4Q6P8W9 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC14.36□□□□□ -0.11
Hmgb4Q6P8W9 Gm17150-201ENSMUST00000165577 381 ntBASIC14.36□□□□□ -0.11
Hmgb4Q6P8W9 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgb4Q6P8W9 Mir7085-201ENSMUST00000184353 66 ntBASIC14.36□□□□□ -0.11
Hmgb4Q6P8W9 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC14.36□□□□□ -0.11
Hmgb4Q6P8W9 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.36□□□□□ -0.11
Hmgb4Q6P8W9 Gm44719-201ENSMUST00000206404 149 ntBASIC14.36□□□□□ -0.11
Hmgb4Q6P8W9 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC14.36□□□□□ -0.11
Hmgb4Q6P8W9 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.36□□□□□ -0.11
Hmgb4Q6P8W9 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Hmgb4Q6P8W9 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Hmgb4Q6P8W9 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.36□□□□□ -0.11
Hmgb4Q6P8W9 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Hmgb4Q6P8W9 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Hmgb4Q6P8W9 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgb4Q6P8W9 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgb4Q6P8W9 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgb4Q6P8W9 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmgb4Q6P8W9 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Hmgb4Q6P8W9 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
Hmgb4Q6P8W9 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgb4Q6P8W9 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgb4Q6P8W9 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgb4Q6P8W9 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Hmgb4Q6P8W9 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms