Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sp140Q6NSQ5 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sp140Q6NSQ5 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sp140Q6NSQ5 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sp140Q6NSQ5 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Sp140Q6NSQ5 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sp140Q6NSQ5 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Sp140Q6NSQ5 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Sp140Q6NSQ5 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Sp140Q6NSQ5 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.94□□□□□ -0.18
Sp140Q6NSQ5 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.94□□□□□ -0.18
Sp140Q6NSQ5 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sp140Q6NSQ5 Gm7775-201ENSMUST00000218871 853 ntBASIC13.94□□□□□ -0.18
Sp140Q6NSQ5 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.94□□□□□ -0.18
Sp140Q6NSQ5 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
Sp140Q6NSQ5 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sp140Q6NSQ5 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Sp140Q6NSQ5 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sp140Q6NSQ5 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Sp140Q6NSQ5 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sp140Q6NSQ5 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sp140Q6NSQ5 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Sp140Q6NSQ5 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sp140Q6NSQ5 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sp140Q6NSQ5 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sp140Q6NSQ5 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.94□□□□□ -0.18
Sp140Q6NSQ5 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sp140Q6NSQ5 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Sp140Q6NSQ5 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.93□□□□□ -0.18
Sp140Q6NSQ5 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sp140Q6NSQ5 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sp140Q6NSQ5 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sp140Q6NSQ5 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sp140Q6NSQ5 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sp140Q6NSQ5 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sp140Q6NSQ5 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sp140Q6NSQ5 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.93□□□□□ -0.18
Sp140Q6NSQ5 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sp140Q6NSQ5 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sp140Q6NSQ5 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sp140Q6NSQ5 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sp140Q6NSQ5 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sp140Q6NSQ5 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Sp140Q6NSQ5 Gm13453-201ENSMUST00000118708 357 ntBASIC13.93□□□□□ -0.18
Sp140Q6NSQ5 Gm13385-201ENSMUST00000121089 220 ntBASIC13.93□□□□□ -0.18
Sp140Q6NSQ5 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.93□□□□□ -0.18
Sp140Q6NSQ5 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.93□□□□□ -0.18
Sp140Q6NSQ5 Gm3436-201ENSMUST00000179930 840 ntBASIC13.93□□□□□ -0.18
Sp140Q6NSQ5 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sp140Q6NSQ5 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Sp140Q6NSQ5 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Sp140Q6NSQ5 Gm10766-202ENSMUST00000194123 606 ntBASIC13.93□□□□□ -0.18
Sp140Q6NSQ5 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sp140Q6NSQ5 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.93□□□□□ -0.18
Sp140Q6NSQ5 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.93□□□□□ -0.18
Sp140Q6NSQ5 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Sp140Q6NSQ5 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sp140Q6NSQ5 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sp140Q6NSQ5 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sp140Q6NSQ5 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sp140Q6NSQ5 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sp140Q6NSQ5 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.93□□□□□ -0.18
Sp140Q6NSQ5 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Sp140Q6NSQ5 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sp140Q6NSQ5 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sp140Q6NSQ5 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sp140Q6NSQ5 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Sp140Q6NSQ5 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sp140Q6NSQ5 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sp140Q6NSQ5 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Sp140Q6NSQ5 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.92□□□□□ -0.18
Sp140Q6NSQ5 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sp140Q6NSQ5 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sp140Q6NSQ5 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sp140Q6NSQ5 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sp140Q6NSQ5 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.92□□□□□ -0.18
Sp140Q6NSQ5 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.92□□□□□ -0.18
Sp140Q6NSQ5 Gm9063-201ENSMUST00000223299 582 ntBASIC13.92□□□□□ -0.18
Sp140Q6NSQ5 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sp140Q6NSQ5 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sp140Q6NSQ5 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sp140Q6NSQ5 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sp140Q6NSQ5 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sp140Q6NSQ5 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sp140Q6NSQ5 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.92□□□□□ -0.18
Sp140Q6NSQ5 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.92□□□□□ -0.18
Sp140Q6NSQ5 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
Sp140Q6NSQ5 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sp140Q6NSQ5 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Sp140Q6NSQ5 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sp140Q6NSQ5 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sp140Q6NSQ5 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.92□□□□□ -0.18
Sp140Q6NSQ5 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sp140Q6NSQ5 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sp140Q6NSQ5 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.91□□□□□ -0.18
Sp140Q6NSQ5 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Sp140Q6NSQ5 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sp140Q6NSQ5 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sp140Q6NSQ5 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sp140Q6NSQ5 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms