Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scube3Q66PY1 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scube3Q66PY1 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scube3Q66PY1 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Scube3Q66PY1 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Scube3Q66PY1 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Scube3Q66PY1 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.46□□□□□ -0.1
Scube3Q66PY1 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.46□□□□□ -0.1
Scube3Q66PY1 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Scube3Q66PY1 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Scube3Q66PY1 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Scube3Q66PY1 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scube3Q66PY1 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Scube3Q66PY1 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.45□□□□□ -0.1
Scube3Q66PY1 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scube3Q66PY1 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Scube3Q66PY1 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scube3Q66PY1 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scube3Q66PY1 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scube3Q66PY1 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.45□□□□□ -0.1
Scube3Q66PY1 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scube3Q66PY1 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Scube3Q66PY1 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Scube3Q66PY1 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Scube3Q66PY1 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Scube3Q66PY1 Gm5083-202ENSMUST00000163056 1204 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Scube3Q66PY1 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scube3Q66PY1 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.45□□□□□ -0.1
Scube3Q66PY1 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC14.45□□□□□ -0.1
Scube3Q66PY1 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scube3Q66PY1 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC14.45□□□□□ -0.1
Scube3Q66PY1 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Scube3Q66PY1 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Scube3Q66PY1 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Scube3Q66PY1 Gm19220-201ENSMUST00000222682 803 ntBASIC14.45□□□□□ -0.1
Scube3Q66PY1 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.45□□□□□ -0.1
Scube3Q66PY1 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scube3Q66PY1 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC14.45□□□□□ -0.1
Scube3Q66PY1 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scube3Q66PY1 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scube3Q66PY1 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scube3Q66PY1 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scube3Q66PY1 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Scube3Q66PY1 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scube3Q66PY1 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scube3Q66PY1 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scube3Q66PY1 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scube3Q66PY1 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scube3Q66PY1 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scube3Q66PY1 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scube3Q66PY1 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scube3Q66PY1 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scube3Q66PY1 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scube3Q66PY1 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scube3Q66PY1 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Scube3Q66PY1 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scube3Q66PY1 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scube3Q66PY1 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scube3Q66PY1 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Scube3Q66PY1 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scube3Q66PY1 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scube3Q66PY1 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scube3Q66PY1 Gm14928-201ENSMUST00000120198 477 ntBASIC14.44□□□□□ -0.1
Scube3Q66PY1 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Scube3Q66PY1 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC14.44□□□□□ -0.1
Scube3Q66PY1 Mir6392-201ENSMUST00000184924 108 ntBASIC14.44□□□□□ -0.1
Scube3Q66PY1 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.44□□□□□ -0.1
Scube3Q66PY1 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.44□□□□□ -0.1
Scube3Q66PY1 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scube3Q66PY1 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.44□□□□□ -0.1
Scube3Q66PY1 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scube3Q66PY1 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.44□□□□□ -0.1
Scube3Q66PY1 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scube3Q66PY1 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Scube3Q66PY1 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scube3Q66PY1 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Scube3Q66PY1 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scube3Q66PY1 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.44□□□□□ -0.1
Scube3Q66PY1 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scube3Q66PY1 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Scube3Q66PY1 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scube3Q66PY1 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Scube3Q66PY1 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scube3Q66PY1 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scube3Q66PY1 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scube3Q66PY1 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scube3Q66PY1 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Scube3Q66PY1 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scube3Q66PY1 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scube3Q66PY1 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scube3Q66PY1 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.43□□□□□ -0.1
Scube3Q66PY1 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Scube3Q66PY1 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scube3Q66PY1 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Scube3Q66PY1 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Scube3Q66PY1 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Scube3Q66PY1 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Scube3Q66PY1 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC14.43□□□□□ -0.1
Scube3Q66PY1 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC14.43□□□□□ -0.1
Scube3Q66PY1 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms