Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.51□□□□□ -0.25
VclQ64727 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
VclQ64727 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.51□□□□□ -0.25
VclQ64727 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
VclQ64727 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
VclQ64727 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
VclQ64727 Mir497b-201ENSMUST00000093601 125 ntBASIC13.51□□□□□ -0.25
VclQ64727 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
VclQ64727 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VclQ64727 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VclQ64727 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VclQ64727 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VclQ64727 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.51□□□□□ -0.25
VclQ64727 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
VclQ64727 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
VclQ64727 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
VclQ64727 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VclQ64727 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
VclQ64727 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
VclQ64727 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VclQ64727 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
VclQ64727 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VclQ64727 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VclQ64727 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
VclQ64727 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VclQ64727 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
VclQ64727 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.5□□□□□ -0.25
VclQ64727 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
VclQ64727 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VclQ64727 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
VclQ64727 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
VclQ64727 Gm15240-201ENSMUST00000118156 720 ntBASIC13.5□□□□□ -0.25
VclQ64727 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
VclQ64727 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.5□□□□□ -0.25
VclQ64727 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.5□□□□□ -0.25
VclQ64727 Gm37917-201ENSMUST00000194711 392 ntBASIC13.5□□□□□ -0.25
VclQ64727 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.5□□□□□ -0.25
VclQ64727 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.5□□□□□ -0.25
VclQ64727 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VclQ64727 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VclQ64727 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
VclQ64727 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.5□□□□□ -0.25
VclQ64727 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
VclQ64727 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
VclQ64727 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VclQ64727 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
VclQ64727 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.5□□□□□ -0.25
VclQ64727 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
VclQ64727 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
VclQ64727 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VclQ64727 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
VclQ64727 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
VclQ64727 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VclQ64727 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VclQ64727 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VclQ64727 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
VclQ64727 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
VclQ64727 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VclQ64727 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VclQ64727 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VclQ64727 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VclQ64727 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VclQ64727 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VclQ64727 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
VclQ64727 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VclQ64727 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
VclQ64727 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.49□□□□□ -0.25
VclQ64727 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VclQ64727 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
VclQ64727 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
VclQ64727 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
VclQ64727 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VclQ64727 Gm2445-201ENSMUST00000182798 989 ntBASIC13.49□□□□□ -0.25
VclQ64727 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.49□□□□□ -0.25
VclQ64727 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
VclQ64727 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.49□□□□□ -0.25
VclQ64727 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.49□□□□□ -0.25
VclQ64727 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VclQ64727 Gm15823-201ENSMUST00000064305 670 ntBASIC13.49□□□□□ -0.25
VclQ64727 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.49□□□□□ -0.25
VclQ64727 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
VclQ64727 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
VclQ64727 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
VclQ64727 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
VclQ64727 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VclQ64727 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VclQ64727 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
VclQ64727 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
VclQ64727 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
VclQ64727 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
VclQ64727 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VclQ64727 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VclQ64727 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
VclQ64727 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.49□□□□□ -0.25
VclQ64727 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VclQ64727 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
VclQ64727 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VclQ64727 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
VclQ64727 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VclQ64727 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms