Protein–RNA interactions for Protein: Q62425

Ndufa4, Cytochrome c oxidase subunit NDUFA4, mousemouse

Known RBP Predictions only

Length 82 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa4Q62425 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ndufa4Q62425 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ndufa4Q62425 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ndufa4Q62425 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC9.94□□□□□ -0.82
Ndufa4Q62425 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ndufa4Q62425 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Ndufa4Q62425 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ndufa4Q62425 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ndufa4Q62425 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ndufa4Q62425 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ndufa4Q62425 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC9.94□□□□□ -0.82
Ndufa4Q62425 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC9.94□□□□□ -0.82
Ndufa4Q62425 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC9.94□□□□□ -0.82
Ndufa4Q62425 Gm15483-201ENSMUST00000120338 456 ntBASIC9.94□□□□□ -0.82
Ndufa4Q62425 Gm13597-201ENSMUST00000121239 375 ntBASIC9.94□□□□□ -0.82
Ndufa4Q62425 Gm7862-201ENSMUST00000121461 292 ntBASIC9.94□□□□□ -0.82
Ndufa4Q62425 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ndufa4Q62425 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC9.94□□□□□ -0.82
Ndufa4Q62425 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ndufa4Q62425 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ndufa4Q62425 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC9.94□□□□□ -0.82
Ndufa4Q62425 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ndufa4Q62425 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ndufa4Q62425 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ndufa4Q62425 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Ndufa4Q62425 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC9.94□□□□□ -0.82
Ndufa4Q62425 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ndufa4Q62425 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ndufa4Q62425 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ndufa4Q62425 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ndufa4Q62425 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ndufa4Q62425 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC9.94□□□□□ -0.82
Ndufa4Q62425 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa4Q62425 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa4Q62425 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa4Q62425 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa4Q62425 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC9.93□□□□□ -0.82
Ndufa4Q62425 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa4Q62425 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa4Q62425 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Ndufa4Q62425 Gm6756-201ENSMUST00000180647 1620 ntBASIC9.93□□□□□ -0.82
Ndufa4Q62425 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC9.93□□□□□ -0.82
Ndufa4Q62425 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Ndufa4Q62425 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa4Q62425 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa4Q62425 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa4Q62425 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa4Q62425 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa4Q62425 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa4Q62425 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Ndufa4Q62425 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC9.93□□□□□ -0.82
Ndufa4Q62425 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa4Q62425 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC9.93□□□□□ -0.82
Ndufa4Q62425 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa4Q62425 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa4Q62425 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC9.93□□□□□ -0.82
Ndufa4Q62425 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Ndufa4Q62425 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Ndufa4Q62425 Gm29741-201ENSMUST00000192667 421 ntBASIC9.93□□□□□ -0.82
Ndufa4Q62425 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa4Q62425 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa4Q62425 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC9.93□□□□□ -0.82
Ndufa4Q62425 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa4Q62425 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC9.93□□□□□ -0.82
Ndufa4Q62425 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC9.93□□□□□ -0.82
Ndufa4Q62425 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC9.93□□□□□ -0.82
Ndufa4Q62425 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa4Q62425 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa4Q62425 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Ndufa4Q62425 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC9.93□□□□□ -0.82
Ndufa4Q62425 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC9.93□□□□□ -0.82
Ndufa4Q62425 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa4Q62425 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa4Q62425 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Ndufa4Q62425 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa4Q62425 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa4Q62425 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa4Q62425 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa4Q62425 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC9.93□□□□□ -0.82
Ndufa4Q62425 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa4Q62425 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ndufa4Q62425 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Ndufa4Q62425 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC9.93□□□□□ -0.82
Ndufa4Q62425 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC9.93□□□□□ -0.82
Ndufa4Q62425 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ndufa4Q62425 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ndufa4Q62425 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Ndufa4Q62425 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ndufa4Q62425 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ndufa4Q62425 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ndufa4Q62425 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ndufa4Q62425 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ndufa4Q62425 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ndufa4Q62425 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ndufa4Q62425 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC9.92□□□□□ -0.82
Ndufa4Q62425 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ndufa4Q62425 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Ndufa4Q62425 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ndufa4Q62425 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ndufa4Q62425 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms