Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SspnQ62147 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.51□□□□□ -0.57
SspnQ62147 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SspnQ62147 BC001981-202ENSMUST00000191393 1545 ntBASIC11.51□□□□□ -0.57
SspnQ62147 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SspnQ62147 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
SspnQ62147 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SspnQ62147 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SspnQ62147 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.51□□□□□ -0.57
SspnQ62147 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SspnQ62147 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.51□□□□□ -0.57
SspnQ62147 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SspnQ62147 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SspnQ62147 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC11.51□□□□□ -0.57
SspnQ62147 Gm9719-201ENSMUST00000162765 543 ntBASIC11.51□□□□□ -0.57
SspnQ62147 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC11.51□□□□□ -0.57
SspnQ62147 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC11.51□□□□□ -0.57
SspnQ62147 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC11.51□□□□□ -0.57
SspnQ62147 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SspnQ62147 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC11.51□□□□□ -0.57
SspnQ62147 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SspnQ62147 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SspnQ62147 Gm42769-201ENSMUST00000198576 1659 ntBASIC11.51□□□□□ -0.57
SspnQ62147 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
SspnQ62147 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC11.51□□□□□ -0.57
SspnQ62147 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
SspnQ62147 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
SspnQ62147 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SspnQ62147 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SspnQ62147 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SspnQ62147 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SspnQ62147 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SspnQ62147 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SspnQ62147 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC11.51□□□□□ -0.57
SspnQ62147 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SspnQ62147 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SspnQ62147 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SspnQ62147 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.51□□□□□ -0.57
SspnQ62147 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC11.5□□□□□ -0.57
SspnQ62147 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC11.5□□□□□ -0.57
SspnQ62147 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
SspnQ62147 CT030684.3-201ENSMUST00000227308 2445 ntBASIC11.5□□□□□ -0.57
SspnQ62147 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SspnQ62147 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC11.5□□□□□ -0.57
SspnQ62147 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
SspnQ62147 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SspnQ62147 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
SspnQ62147 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SspnQ62147 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SspnQ62147 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC11.5□□□□□ -0.57
SspnQ62147 Gm18766-201ENSMUST00000189811 808 ntBASIC11.5□□□□□ -0.57
SspnQ62147 Gm7774-201ENSMUST00000200064 533 ntBASIC11.5□□□□□ -0.57
SspnQ62147 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SspnQ62147 AC132104.2-201ENSMUST00000215011 266 ntBASIC11.5□□□□□ -0.57
SspnQ62147 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC11.5□□□□□ -0.57
SspnQ62147 AC090659.2-201ENSMUST00000225378 1186 ntBASIC11.5□□□□□ -0.57
SspnQ62147 CT030704.2-201ENSMUST00000228887 494 ntBASIC11.5□□□□□ -0.57
SspnQ62147 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SspnQ62147 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
SspnQ62147 Gm42872-201ENSMUST00000200026 1967 ntBASIC11.5□□□□□ -0.57
SspnQ62147 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
SspnQ62147 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SspnQ62147 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SspnQ62147 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC11.5□□□□□ -0.57
SspnQ62147 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SspnQ62147 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SspnQ62147 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC11.5□□□□□ -0.57
SspnQ62147 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
SspnQ62147 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SspnQ62147 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SspnQ62147 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
SspnQ62147 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
SspnQ62147 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
SspnQ62147 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SspnQ62147 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
SspnQ62147 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SspnQ62147 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SspnQ62147 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
SspnQ62147 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SspnQ62147 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
SspnQ62147 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
SspnQ62147 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
SspnQ62147 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SspnQ62147 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SspnQ62147 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SspnQ62147 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SspnQ62147 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SspnQ62147 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
SspnQ62147 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SspnQ62147 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SspnQ62147 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SspnQ62147 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
SspnQ62147 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SspnQ62147 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SspnQ62147 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
SspnQ62147 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC11.49□□□□□ -0.57
SspnQ62147 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC11.49□□□□□ -0.57
SspnQ62147 Gm8410-201ENSMUST00000117225 605 ntBASIC11.49□□□□□ -0.57
SspnQ62147 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SspnQ62147 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms