Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm5369-201ENSMUST00000217499 588 ntBASIC12.58□□□□□ -0.4
VcanQ62059 Gm17330-201ENSMUST00000221047 165 ntBASIC12.58□□□□□ -0.4
VcanQ62059 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
VcanQ62059 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC12.58□□□□□ -0.4
VcanQ62059 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
VcanQ62059 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
VcanQ62059 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VcanQ62059 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
VcanQ62059 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.58□□□□□ -0.4
VcanQ62059 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VcanQ62059 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC12.58□□□□□ -0.4
VcanQ62059 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC12.58□□□□□ -0.4
VcanQ62059 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.58□□□□□ -0.4
VcanQ62059 AC140375.1-201ENSMUST00000225421 694 ntBASIC12.58□□□□□ -0.4
VcanQ62059 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
VcanQ62059 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.58□□□□□ -0.4
VcanQ62059 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
VcanQ62059 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
VcanQ62059 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
VcanQ62059 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VcanQ62059 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.57□□□□□ -0.4
VcanQ62059 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VcanQ62059 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VcanQ62059 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC12.57□□□□□ -0.4
VcanQ62059 Gm11531-201ENSMUST00000117614 555 ntBASIC12.57□□□□□ -0.4
VcanQ62059 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
VcanQ62059 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.57□□□□□ -0.4
VcanQ62059 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC12.57□□□□□ -0.4
VcanQ62059 Gm45224-201ENSMUST00000208203 414 ntBASIC12.57□□□□□ -0.4
VcanQ62059 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
VcanQ62059 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
VcanQ62059 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VcanQ62059 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.57□□□□□ -0.4
VcanQ62059 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VcanQ62059 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VcanQ62059 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VcanQ62059 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VcanQ62059 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
VcanQ62059 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VcanQ62059 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VcanQ62059 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
VcanQ62059 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.57□□□□□ -0.4
VcanQ62059 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC12.57□□□□□ -0.4
VcanQ62059 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.57□□□□□ -0.4
VcanQ62059 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.57□□□□□ -0.4
VcanQ62059 Gm19163-201ENSMUST00000223313 780 ntBASIC12.57□□□□□ -0.4
VcanQ62059 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VcanQ62059 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VcanQ62059 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.57□□□□□ -0.4
VcanQ62059 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VcanQ62059 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VcanQ62059 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VcanQ62059 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
VcanQ62059 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VcanQ62059 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
VcanQ62059 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.57□□□□□ -0.4
VcanQ62059 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC12.56□□□□□ -0.4
VcanQ62059 Gm10051-201ENSMUST00000145209 414 ntBASIC12.56□□□□□ -0.4
VcanQ62059 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
VcanQ62059 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.56□□□□□ -0.4
VcanQ62059 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VcanQ62059 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VcanQ62059 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC12.56□□□□□ -0.4
VcanQ62059 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VcanQ62059 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
VcanQ62059 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VcanQ62059 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.56□□□□□ -0.4
VcanQ62059 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VcanQ62059 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
VcanQ62059 Gm17040-202ENSMUST00000170597 889 ntBASIC12.56□□□□□ -0.4
VcanQ62059 Gm44262-201ENSMUST00000204969 372 ntBASIC12.56□□□□□ -0.4
VcanQ62059 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.56□□□□□ -0.4
VcanQ62059 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VcanQ62059 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VcanQ62059 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VcanQ62059 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VcanQ62059 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VcanQ62059 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VcanQ62059 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
VcanQ62059 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
VcanQ62059 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
VcanQ62059 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.56□□□□□ -0.4
VcanQ62059 Gm44405-201ENSMUST00000198952 126 ntBASIC12.56□□□□□ -0.4
VcanQ62059 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.56□□□□□ -0.4
VcanQ62059 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VcanQ62059 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VcanQ62059 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.56□□□□□ -0.4
VcanQ62059 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.56□□□□□ -0.4
VcanQ62059 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VcanQ62059 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VcanQ62059 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.56□□□□□ -0.4
VcanQ62059 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VcanQ62059 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
VcanQ62059 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.56□□□□□ -0.4
VcanQ62059 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
VcanQ62059 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
VcanQ62059 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.55□□□□□ -0.4
VcanQ62059 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
VcanQ62059 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VcanQ62059 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms