Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Gm44645-201ENSMUST00000205492 1653 ntBASIC18.02■□□□□ 0.47
Gli3Q61602 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Gli3Q61602 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Gli3Q61602 Gm14150-201ENSMUST00000122404 1354 ntBASIC18.02■□□□□ 0.47
Gli3Q61602 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Gli3Q61602 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Gli3Q61602 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gli3Q61602 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gli3Q61602 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC18.01■□□□□ 0.47
Gli3Q61602 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Gli3Q61602 Gm13736-201ENSMUST00000119272 253 ntBASIC18.01■□□□□ 0.47
Gli3Q61602 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC18.01■□□□□ 0.47
Gli3Q61602 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC18.01■□□□□ 0.47
Gli3Q61602 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC18.01■□□□□ 0.47
Gli3Q61602 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Gli3Q61602 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC18.01■□□□□ 0.47
Gli3Q61602 Gm3028-201ENSMUST00000213805 1119 ntBASIC18.01■□□□□ 0.47
Gli3Q61602 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gli3Q61602 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gli3Q61602 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Gli3Q61602 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gli3Q61602 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gli3Q61602 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Gli3Q61602 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gli3Q61602 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gli3Q61602 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gli3Q61602 Fbxl12-205ENSMUST00000140702 1555 ntBASIC18.01■□□□□ 0.47
Gli3Q61602 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC18.01■□□□□ 0.47
Gli3Q61602 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gli3Q61602 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gli3Q61602 Gm14058-201ENSMUST00000116082 735 ntBASIC18■□□□□ 0.47
Gli3Q61602 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC18■□□□□ 0.47
Gli3Q61602 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC18■□□□□ 0.47
Gli3Q61602 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC18■□□□□ 0.47
Gli3Q61602 Gm9358-201ENSMUST00000183067 927 ntBASIC18■□□□□ 0.47
Gli3Q61602 Gm34023-201ENSMUST00000195539 217 ntBASIC18■□□□□ 0.47
Gli3Q61602 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC18■□□□□ 0.47
Gli3Q61602 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC18■□□□□ 0.47
Gli3Q61602 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gli3Q61602 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gli3Q61602 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gli3Q61602 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gli3Q61602 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gli3Q61602 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Gli3Q61602 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
Gli3Q61602 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Gli3Q61602 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gli3Q61602 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gli3Q61602 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gli3Q61602 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Gli3Q61602 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gli3Q61602 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gli3Q61602 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gli3Q61602 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
Gli3Q61602 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gli3Q61602 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Gli3Q61602 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Gli3Q61602 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Gli3Q61602 Gm23218-201ENSMUST00000158124 276 ntBASIC18■□□□□ 0.47
Gli3Q61602 Gm9463-201ENSMUST00000206707 601 ntBASIC18■□□□□ 0.47
Gli3Q61602 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC18■□□□□ 0.47
Gli3Q61602 AC166051.1-201ENSMUST00000214313 210 ntBASIC18■□□□□ 0.47
Gli3Q61602 Gm4797-201ENSMUST00000219075 1283 ntBASIC18■□□□□ 0.47
Gli3Q61602 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Gli3Q61602 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gli3Q61602 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gli3Q61602 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC17.99■□□□□ 0.47
Gli3Q61602 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gli3Q61602 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gli3Q61602 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gli3Q61602 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Gli3Q61602 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gli3Q61602 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Gli3Q61602 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
Gli3Q61602 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Gli3Q61602 CT485607.1-201ENSMUST00000216100 85 ntBASIC17.99■□□□□ 0.47
Gli3Q61602 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gli3Q61602 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gli3Q61602 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gli3Q61602 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Gli3Q61602 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gli3Q61602 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Gli3Q61602 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC17.99■□□□□ 0.47
Gli3Q61602 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gli3Q61602 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gli3Q61602 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gli3Q61602 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Gli3Q61602 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC17.98■□□□□ 0.47
Gli3Q61602 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gli3Q61602 Gm37411-201ENSMUST00000194180 2282 ntBASIC17.98■□□□□ 0.47
Gli3Q61602 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Gli3Q61602 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Gli3Q61602 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gli3Q61602 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gli3Q61602 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gli3Q61602 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Gli3Q61602 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gli3Q61602 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.98■□□□□ 0.47
Gli3Q61602 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gli3Q61602 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms