Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Smarcd1Q61466 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.13
Smarcd1Q61466 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcd1Q61466 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcd1Q61466 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcd1Q61466 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcd1Q61466 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.26□□□□□ -0.13
Smarcd1Q61466 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Smarcd1Q61466 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcd1Q61466 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcd1Q61466 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Smarcd1Q61466 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Smarcd1Q61466 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.26□□□□□ -0.13
Smarcd1Q61466 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcd1Q61466 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.26□□□□□ -0.13
Smarcd1Q61466 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.26□□□□□ -0.13
Smarcd1Q61466 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Smarcd1Q61466 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcd1Q61466 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.26□□□□□ -0.13
Smarcd1Q61466 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcd1Q61466 Gm15163-201ENSMUST00000120749 1302 ntBASIC14.26□□□□□ -0.13
Smarcd1Q61466 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcd1Q61466 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcd1Q61466 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcd1Q61466 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.26□□□□□ -0.13
Smarcd1Q61466 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.26□□□□□ -0.13
Smarcd1Q61466 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Smarcd1Q61466 Gm15806-201ENSMUST00000120696 955 ntBASIC14.26□□□□□ -0.13
Smarcd1Q61466 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcd1Q61466 Gm9002-201ENSMUST00000178437 499 ntBASIC14.26□□□□□ -0.13
Smarcd1Q61466 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcd1Q61466 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcd1Q61466 Gm2495-201ENSMUST00000191160 466 ntBASIC14.26□□□□□ -0.13
Smarcd1Q61466 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.26□□□□□ -0.13
Smarcd1Q61466 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcd1Q61466 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Smarcd1Q61466 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcd1Q61466 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcd1Q61466 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcd1Q61466 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcd1Q61466 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcd1Q61466 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcd1Q61466 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcd1Q61466 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcd1Q61466 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcd1Q61466 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Smarcd1Q61466 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
Smarcd1Q61466 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcd1Q61466 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcd1Q61466 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.25□□□□□ -0.13
Smarcd1Q61466 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcd1Q61466 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Smarcd1Q61466 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Smarcd1Q61466 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
Smarcd1Q61466 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcd1Q61466 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcd1Q61466 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcd1Q61466 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcd1Q61466 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcd1Q61466 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcd1Q61466 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.25□□□□□ -0.13
Smarcd1Q61466 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.25□□□□□ -0.13
Smarcd1Q61466 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Smarcd1Q61466 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcd1Q61466 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcd1Q61466 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcd1Q61466 Gm42550-201ENSMUST00000201553 960 ntBASIC14.25□□□□□ -0.13
Smarcd1Q61466 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.25□□□□□ -0.13
Smarcd1Q61466 Gm5186-201ENSMUST00000218781 920 ntBASIC14.25□□□□□ -0.13
Smarcd1Q61466 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcd1Q61466 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcd1Q61466 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcd1Q61466 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcd1Q61466 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcd1Q61466 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcd1Q61466 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcd1Q61466 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcd1Q61466 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcd1Q61466 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcd1Q61466 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcd1Q61466 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcd1Q61466 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcd1Q61466 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcd1Q61466 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcd1Q61466 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcd1Q61466 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Smarcd1Q61466 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcd1Q61466 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcd1Q61466 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
Smarcd1Q61466 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcd1Q61466 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcd1Q61466 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Smarcd1Q61466 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcd1Q61466 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcd1Q61466 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcd1Q61466 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Smarcd1Q61466 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Smarcd1Q61466 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcd1Q61466 Gm44397-201ENSMUST00000195950 113 ntBASIC14.24□□□□□ -0.13
Smarcd1Q61466 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms