Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col12a1Q60847 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Col12a1Q60847 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Col12a1Q60847 Gm26185-201ENSMUST00000157692 266 ntBASIC13.24□□□□□ -0.29
Col12a1Q60847 Gm26361-201ENSMUST00000158868 186 ntBASIC13.24□□□□□ -0.29
Col12a1Q60847 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC13.24□□□□□ -0.29
Col12a1Q60847 AC135469.1-201ENSMUST00000225984 772 ntBASIC13.24□□□□□ -0.29
Col12a1Q60847 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col12a1Q60847 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col12a1Q60847 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col12a1Q60847 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Col12a1Q60847 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col12a1Q60847 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col12a1Q60847 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col12a1Q60847 Gm6580-201ENSMUST00000117504 1357 ntBASIC13.24□□□□□ -0.29
Col12a1Q60847 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col12a1Q60847 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col12a1Q60847 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col12a1Q60847 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col12a1Q60847 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Col12a1Q60847 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col12a1Q60847 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col12a1Q60847 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC13.24□□□□□ -0.29
Col12a1Q60847 Ntng1-201ENSMUST00000051253 327 ntBASIC13.24□□□□□ -0.29
Col12a1Q60847 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Col12a1Q60847 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col12a1Q60847 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col12a1Q60847 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col12a1Q60847 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Col12a1Q60847 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col12a1Q60847 Gm43548-201ENSMUST00000197139 2353 ntBASIC13.23□□□□□ -0.29
Col12a1Q60847 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col12a1Q60847 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col12a1Q60847 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col12a1Q60847 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Col12a1Q60847 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Col12a1Q60847 Gm15770-201ENSMUST00000117498 584 ntBASIC13.23□□□□□ -0.29
Col12a1Q60847 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Col12a1Q60847 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC13.23□□□□□ -0.29
Col12a1Q60847 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.23□□□□□ -0.29
Col12a1Q60847 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col12a1Q60847 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col12a1Q60847 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC13.23□□□□□ -0.29
Col12a1Q60847 Ighv5-7-201ENSMUST00000192302 244 ntBASIC13.23□□□□□ -0.29
Col12a1Q60847 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col12a1Q60847 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col12a1Q60847 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Col12a1Q60847 Gm45495-201ENSMUST00000200940 1700 ntBASIC13.23□□□□□ -0.29
Col12a1Q60847 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col12a1Q60847 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Col12a1Q60847 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC13.23□□□□□ -0.29
Col12a1Q60847 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col12a1Q60847 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col12a1Q60847 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.23□□□□□ -0.29
Col12a1Q60847 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Col12a1Q60847 Gm13611-201ENSMUST00000118269 318 ntBASIC13.23□□□□□ -0.29
Col12a1Q60847 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC13.23□□□□□ -0.29
Col12a1Q60847 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Col12a1Q60847 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col12a1Q60847 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.23□□□□□ -0.29
Col12a1Q60847 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC13.23□□□□□ -0.29
Col12a1Q60847 Gm5369-201ENSMUST00000217499 588 ntBASIC13.23□□□□□ -0.29
Col12a1Q60847 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col12a1Q60847 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col12a1Q60847 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col12a1Q60847 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col12a1Q60847 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.23□□□□□ -0.29
Col12a1Q60847 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.22□□□□□ -0.29
Col12a1Q60847 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col12a1Q60847 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col12a1Q60847 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col12a1Q60847 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col12a1Q60847 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Col12a1Q60847 Gm16202-201ENSMUST00000117532 544 ntBASIC13.22□□□□□ -0.29
Col12a1Q60847 Gm13996-201ENSMUST00000118456 430 ntBASIC13.22□□□□□ -0.29
Col12a1Q60847 Gm13045-201ENSMUST00000119019 712 ntBASIC13.22□□□□□ -0.29
Col12a1Q60847 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col12a1Q60847 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col12a1Q60847 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col12a1Q60847 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col12a1Q60847 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC13.22□□□□□ -0.29
Col12a1Q60847 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Col12a1Q60847 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col12a1Q60847 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.22□□□□□ -0.29
Col12a1Q60847 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.22□□□□□ -0.29
Col12a1Q60847 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col12a1Q60847 Mir698-201ENSMUST00000102164 109 ntBASIC13.22□□□□□ -0.29
Col12a1Q60847 Gm14109-201ENSMUST00000118814 309 ntBASIC13.22□□□□□ -0.29
Col12a1Q60847 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.22□□□□□ -0.29
Col12a1Q60847 Gm3096-201ENSMUST00000185770 364 ntBASIC13.22□□□□□ -0.29
Col12a1Q60847 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC13.22□□□□□ -0.29
Col12a1Q60847 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.22□□□□□ -0.29
Col12a1Q60847 Gm7207-201ENSMUST00000211575 1067 ntBASIC13.22□□□□□ -0.29
Col12a1Q60847 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col12a1Q60847 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col12a1Q60847 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col12a1Q60847 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col12a1Q60847 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col12a1Q60847 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Col12a1Q60847 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms