Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav5d-4Q5R1F6 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav5d-4Q5R1F6 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav5d-4Q5R1F6 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav5d-4Q5R1F6 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav5d-4Q5R1F6 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav5d-4Q5R1F6 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav5d-4Q5R1F6 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav5d-4Q5R1F6 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Trav5d-4Q5R1F6 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav5d-4Q5R1F6 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav5d-4Q5R1F6 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav5d-4Q5R1F6 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trav5d-4Q5R1F6 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav5d-4Q5R1F6 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav5d-4Q5R1F6 Gm21470-201ENSMUST00000187680 696 ntBASIC11.82□□□□□ -0.52
Trav5d-4Q5R1F6 Gm37171-201ENSMUST00000192636 1185 ntBASIC11.82□□□□□ -0.52
Trav5d-4Q5R1F6 Gm44344-201ENSMUST00000200287 129 ntBASIC11.82□□□□□ -0.52
Trav5d-4Q5R1F6 AC139382.1-201ENSMUST00000221402 498 ntBASIC11.82□□□□□ -0.52
Trav5d-4Q5R1F6 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav5d-4Q5R1F6 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav5d-4Q5R1F6 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav5d-4Q5R1F6 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav5d-4Q5R1F6 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav5d-4Q5R1F6 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav5d-4Q5R1F6 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav5d-4Q5R1F6 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav5d-4Q5R1F6 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav5d-4Q5R1F6 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trav5d-4Q5R1F6 CT030684.3-201ENSMUST00000227308 2445 ntBASIC11.81□□□□□ -0.52
Trav5d-4Q5R1F6 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav5d-4Q5R1F6 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav5d-4Q5R1F6 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav5d-4Q5R1F6 Gm5320-201ENSMUST00000207163 1519 ntBASIC11.81□□□□□ -0.52
Trav5d-4Q5R1F6 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trav5d-4Q5R1F6 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav5d-4Q5R1F6 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav5d-4Q5R1F6 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav5d-4Q5R1F6 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav5d-4Q5R1F6 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav5d-4Q5R1F6 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav5d-4Q5R1F6 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav5d-4Q5R1F6 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav5d-4Q5R1F6 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav5d-4Q5R1F6 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Trav5d-4Q5R1F6 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav5d-4Q5R1F6 Ighv1-51-201ENSMUST00000192903 354 ntBASIC11.81□□□□□ -0.52
Trav5d-4Q5R1F6 AC153872.1-201ENSMUST00000199539 128 ntBASIC11.81□□□□□ -0.52
Trav5d-4Q5R1F6 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav5d-4Q5R1F6 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav5d-4Q5R1F6 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trav5d-4Q5R1F6 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav5d-4Q5R1F6 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav5d-4Q5R1F6 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav5d-4Q5R1F6 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav5d-4Q5R1F6 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav5d-4Q5R1F6 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav5d-4Q5R1F6 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav5d-4Q5R1F6 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav5d-4Q5R1F6 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav5d-4Q5R1F6 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav5d-4Q5R1F6 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav5d-4Q5R1F6 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav5d-4Q5R1F6 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav5d-4Q5R1F6 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav5d-4Q5R1F6 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav5d-4Q5R1F6 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav5d-4Q5R1F6 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav5d-4Q5R1F6 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav5d-4Q5R1F6 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav5d-4Q5R1F6 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav5d-4Q5R1F6 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav5d-4Q5R1F6 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav5d-4Q5R1F6 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav5d-4Q5R1F6 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav5d-4Q5R1F6 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav5d-4Q5R1F6 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav5d-4Q5R1F6 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav5d-4Q5R1F6 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav5d-4Q5R1F6 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trav5d-4Q5R1F6 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav5d-4Q5R1F6 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav5d-4Q5R1F6 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC11.8□□□□□ -0.52
Trav5d-4Q5R1F6 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Trav5d-4Q5R1F6 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav5d-4Q5R1F6 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav5d-4Q5R1F6 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav5d-4Q5R1F6 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Trav5d-4Q5R1F6 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav5d-4Q5R1F6 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav5d-4Q5R1F6 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.8□□□□□ -0.52
Trav5d-4Q5R1F6 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav5d-4Q5R1F6 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav5d-4Q5R1F6 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav5d-4Q5R1F6 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav5d-4Q5R1F6 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav5d-4Q5R1F6 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Trav5d-4Q5R1F6 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav5d-4Q5R1F6 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav5d-4Q5R1F6 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms