Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf20Q5DTM8 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf20Q5DTM8 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf20Q5DTM8 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC16.35■□□□□ 0.21
Rnf20Q5DTM8 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Rnf20Q5DTM8 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC16.35■□□□□ 0.21
Rnf20Q5DTM8 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Rnf20Q5DTM8 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC16.35■□□□□ 0.21
Rnf20Q5DTM8 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Rnf20Q5DTM8 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf20Q5DTM8 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC16.35■□□□□ 0.21
Rnf20Q5DTM8 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Rnf20Q5DTM8 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf20Q5DTM8 Acot6-202ENSMUST00000222921 3622 ntBASIC16.34■□□□□ 0.21
Rnf20Q5DTM8 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Rnf20Q5DTM8 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Rnf20Q5DTM8 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf20Q5DTM8 Gm30238-201ENSMUST00000195528 2603 ntBASIC16.34■□□□□ 0.21
Rnf20Q5DTM8 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf20Q5DTM8 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf20Q5DTM8 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf20Q5DTM8 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
Rnf20Q5DTM8 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC16.34■□□□□ 0.21
Rnf20Q5DTM8 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC16.34■□□□□ 0.21
Rnf20Q5DTM8 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf20Q5DTM8 AC238811.1-201ENSMUST00000225302 441 ntBASIC16.34■□□□□ 0.21
Rnf20Q5DTM8 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf20Q5DTM8 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf20Q5DTM8 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC16.34■□□□□ 0.21
Rnf20Q5DTM8 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Rnf20Q5DTM8 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Rnf20Q5DTM8 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf20Q5DTM8 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf20Q5DTM8 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf20Q5DTM8 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf20Q5DTM8 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC16.34■□□□□ 0.21
Rnf20Q5DTM8 Gm18244-201ENSMUST00000219747 1566 ntBASIC16.34■□□□□ 0.21
Rnf20Q5DTM8 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf20Q5DTM8 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rnf20Q5DTM8 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rnf20Q5DTM8 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rnf20Q5DTM8 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rnf20Q5DTM8 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rnf20Q5DTM8 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC16.33■□□□□ 0.21
Rnf20Q5DTM8 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf20Q5DTM8 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf20Q5DTM8 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf20Q5DTM8 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf20Q5DTM8 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC16.33■□□□□ 0.2
Rnf20Q5DTM8 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC16.33■□□□□ 0.2
Rnf20Q5DTM8 AC154846.1-201ENSMUST00000226278 862 ntBASIC16.33■□□□□ 0.2
Rnf20Q5DTM8 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf20Q5DTM8 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf20Q5DTM8 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC16.33■□□□□ 0.2
Rnf20Q5DTM8 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Rnf20Q5DTM8 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf20Q5DTM8 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf20Q5DTM8 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
Rnf20Q5DTM8 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf20Q5DTM8 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf20Q5DTM8 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Rnf20Q5DTM8 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf20Q5DTM8 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf20Q5DTM8 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf20Q5DTM8 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf20Q5DTM8 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf20Q5DTM8 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf20Q5DTM8 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf20Q5DTM8 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf20Q5DTM8 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf20Q5DTM8 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf20Q5DTM8 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC16.32■□□□□ 0.2
Rnf20Q5DTM8 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf20Q5DTM8 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf20Q5DTM8 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf20Q5DTM8 Gm13859-201ENSMUST00000119936 1423 ntBASIC16.32■□□□□ 0.2
Rnf20Q5DTM8 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf20Q5DTM8 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf20Q5DTM8 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC16.32■□□□□ 0.2
Rnf20Q5DTM8 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC16.32■□□□□ 0.2
Rnf20Q5DTM8 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC16.32■□□□□ 0.2
Rnf20Q5DTM8 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC16.32■□□□□ 0.2
Rnf20Q5DTM8 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf20Q5DTM8 AC168058.1-201ENSMUST00000219521 2282 ntBASIC16.32■□□□□ 0.2
Rnf20Q5DTM8 AC131997.1-201ENSMUST00000228611 1229 ntBASIC16.32■□□□□ 0.2
Rnf20Q5DTM8 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf20Q5DTM8 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf20Q5DTM8 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf20Q5DTM8 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf20Q5DTM8 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC16.32■□□□□ 0.2
Rnf20Q5DTM8 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf20Q5DTM8 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC16.32■□□□□ 0.2
Rnf20Q5DTM8 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf20Q5DTM8 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf20Q5DTM8 Gm14752-201ENSMUST00000120719 2075 ntBASIC16.31■□□□□ 0.2
Rnf20Q5DTM8 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf20Q5DTM8 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC16.31■□□□□ 0.2
Rnf20Q5DTM8 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf20Q5DTM8 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf20Q5DTM8 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms