Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Spg11Q3UHA3 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Spg11Q3UHA3 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Spg11Q3UHA3 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Spg11Q3UHA3 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Spg11Q3UHA3 Gm17040-202ENSMUST00000170597 889 ntBASIC12.51□□□□□ -0.41
Spg11Q3UHA3 Gm25700-201ENSMUST00000177693 110 ntBASIC12.51□□□□□ -0.41
Spg11Q3UHA3 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Spg11Q3UHA3 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.51□□□□□ -0.41
Spg11Q3UHA3 Gm4768-201ENSMUST00000206199 686 ntBASIC12.51□□□□□ -0.41
Spg11Q3UHA3 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Spg11Q3UHA3 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Spg11Q3UHA3 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Spg11Q3UHA3 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Spg11Q3UHA3 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.51□□□□□ -0.41
Spg11Q3UHA3 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Spg11Q3UHA3 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Spg11Q3UHA3 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Spg11Q3UHA3 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Spg11Q3UHA3 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Spg11Q3UHA3 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Spg11Q3UHA3 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Spg11Q3UHA3 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Spg11Q3UHA3 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Spg11Q3UHA3 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Spg11Q3UHA3 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.51□□□□□ -0.41
Spg11Q3UHA3 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC12.51□□□□□ -0.41
Spg11Q3UHA3 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC12.51□□□□□ -0.41
Spg11Q3UHA3 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.51□□□□□ -0.41
Spg11Q3UHA3 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.51□□□□□ -0.41
Spg11Q3UHA3 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.51□□□□□ -0.41
Spg11Q3UHA3 Gm6867-201ENSMUST00000219165 425 ntBASIC12.51□□□□□ -0.41
Spg11Q3UHA3 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Spg11Q3UHA3 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Spg11Q3UHA3 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.51□□□□□ -0.41
Spg11Q3UHA3 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Spg11Q3UHA3 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Spg11Q3UHA3 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Spg11Q3UHA3 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Spg11Q3UHA3 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Spg11Q3UHA3 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Spg11Q3UHA3 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Spg11Q3UHA3 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Spg11Q3UHA3 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Spg11Q3UHA3 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Spg11Q3UHA3 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Spg11Q3UHA3 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Spg11Q3UHA3 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Spg11Q3UHA3 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Spg11Q3UHA3 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.5□□□□□ -0.41
Spg11Q3UHA3 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC12.5□□□□□ -0.41
Spg11Q3UHA3 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Spg11Q3UHA3 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Spg11Q3UHA3 Gm8738-201ENSMUST00000172606 329 ntBASIC12.5□□□□□ -0.41
Spg11Q3UHA3 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.5□□□□□ -0.41
Spg11Q3UHA3 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Spg11Q3UHA3 Gm45433-201ENSMUST00000209386 247 ntBASIC12.5□□□□□ -0.41
Spg11Q3UHA3 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Spg11Q3UHA3 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Spg11Q3UHA3 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Spg11Q3UHA3 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Spg11Q3UHA3 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC12.5□□□□□ -0.41
Spg11Q3UHA3 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Spg11Q3UHA3 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Spg11Q3UHA3 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Spg11Q3UHA3 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC12.5□□□□□ -0.41
Spg11Q3UHA3 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Spg11Q3UHA3 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Spg11Q3UHA3 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Spg11Q3UHA3 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Spg11Q3UHA3 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Spg11Q3UHA3 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Spg11Q3UHA3 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Spg11Q3UHA3 Ccdc166-201ENSMUST00000182172 2584 ntBASIC12.5□□□□□ -0.41
Spg11Q3UHA3 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Spg11Q3UHA3 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Spg11Q3UHA3 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Spg11Q3UHA3 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Spg11Q3UHA3 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC12.5□□□□□ -0.41
Spg11Q3UHA3 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Spg11Q3UHA3 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.5□□□□□ -0.41
Spg11Q3UHA3 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Spg11Q3UHA3 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Spg11Q3UHA3 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Spg11Q3UHA3 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Spg11Q3UHA3 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Spg11Q3UHA3 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Spg11Q3UHA3 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Spg11Q3UHA3 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Spg11Q3UHA3 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Spg11Q3UHA3 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Spg11Q3UHA3 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Spg11Q3UHA3 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC12.49□□□□□ -0.41
Spg11Q3UHA3 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Spg11Q3UHA3 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.49□□□□□ -0.41
Spg11Q3UHA3 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Spg11Q3UHA3 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Spg11Q3UHA3 Gm13216-201ENSMUST00000117145 591 ntBASIC12.49□□□□□ -0.41
Spg11Q3UHA3 Gm13600-201ENSMUST00000117949 744 ntBASIC12.49□□□□□ -0.41
Spg11Q3UHA3 Gm7541-201ENSMUST00000118361 535 ntBASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms