Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Mir1897-201ENSMUST00000122581 272 ntBASIC14.41□□□□□ -0.1
Cul4aQ3TCH7 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.41□□□□□ -0.1
Cul4aQ3TCH7 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cul4aQ3TCH7 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cul4aQ3TCH7 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.41□□□□□ -0.1
Cul4aQ3TCH7 Gm8927-201ENSMUST00000181978 981 ntBASIC14.41□□□□□ -0.1
Cul4aQ3TCH7 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.41□□□□□ -0.1
Cul4aQ3TCH7 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cul4aQ3TCH7 Gm3222-201ENSMUST00000071282 990 ntBASIC14.41□□□□□ -0.1
Cul4aQ3TCH7 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cul4aQ3TCH7 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cul4aQ3TCH7 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.41□□□□□ -0.1
Cul4aQ3TCH7 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Cul4aQ3TCH7 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Cul4aQ3TCH7 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cul4aQ3TCH7 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cul4aQ3TCH7 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cul4aQ3TCH7 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cul4aQ3TCH7 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cul4aQ3TCH7 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cul4aQ3TCH7 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC14.41□□□□□ -0.1
Cul4aQ3TCH7 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.41□□□□□ -0.1
Cul4aQ3TCH7 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cul4aQ3TCH7 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cul4aQ3TCH7 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cul4aQ3TCH7 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cul4aQ3TCH7 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cul4aQ3TCH7 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cul4aQ3TCH7 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cul4aQ3TCH7 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cul4aQ3TCH7 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Cul4aQ3TCH7 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cul4aQ3TCH7 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cul4aQ3TCH7 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cul4aQ3TCH7 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cul4aQ3TCH7 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
Cul4aQ3TCH7 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cul4aQ3TCH7 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cul4aQ3TCH7 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cul4aQ3TCH7 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cul4aQ3TCH7 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Cul4aQ3TCH7 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cul4aQ3TCH7 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cul4aQ3TCH7 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cul4aQ3TCH7 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cul4aQ3TCH7 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.4□□□□□ -0.1
Cul4aQ3TCH7 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cul4aQ3TCH7 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Cul4aQ3TCH7 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cul4aQ3TCH7 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cul4aQ3TCH7 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cul4aQ3TCH7 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cul4aQ3TCH7 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.4□□□□□ -0.1
Cul4aQ3TCH7 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cul4aQ3TCH7 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Cul4aQ3TCH7 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.4□□□□□ -0.1
Cul4aQ3TCH7 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cul4aQ3TCH7 Gm27533-201ENSMUST00000183800 152 ntBASIC14.4□□□□□ -0.1
Cul4aQ3TCH7 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Cul4aQ3TCH7 Gm10253-201ENSMUST00000194270 940 ntBASIC14.4□□□□□ -0.1
Cul4aQ3TCH7 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cul4aQ3TCH7 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cul4aQ3TCH7 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cul4aQ3TCH7 Gm5779-201ENSMUST00000218467 910 ntBASIC14.4□□□□□ -0.1
Cul4aQ3TCH7 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.4□□□□□ -0.1
Cul4aQ3TCH7 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.4□□□□□ -0.1
Cul4aQ3TCH7 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cul4aQ3TCH7 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Cul4aQ3TCH7 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cul4aQ3TCH7 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cul4aQ3TCH7 Gm4782-201ENSMUST00000168705 2046 ntBASIC14.4□□□□□ -0.1
Cul4aQ3TCH7 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cul4aQ3TCH7 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cul4aQ3TCH7 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cul4aQ3TCH7 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cul4aQ3TCH7 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cul4aQ3TCH7 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cul4aQ3TCH7 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Cul4aQ3TCH7 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cul4aQ3TCH7 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cul4aQ3TCH7 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cul4aQ3TCH7 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.4□□□□□ -0.1
Cul4aQ3TCH7 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cul4aQ3TCH7 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cul4aQ3TCH7 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cul4aQ3TCH7 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cul4aQ3TCH7 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.11
Cul4aQ3TCH7 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cul4aQ3TCH7 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cul4aQ3TCH7 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cul4aQ3TCH7 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cul4aQ3TCH7 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cul4aQ3TCH7 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cul4aQ3TCH7 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cul4aQ3TCH7 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cul4aQ3TCH7 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cul4aQ3TCH7 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cul4aQ3TCH7 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cul4aQ3TCH7 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cul4aQ3TCH7 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms