Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ebf1Q07802 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ebf1Q07802 Acot6-202ENSMUST00000222921 3622 ntBASIC13.9□□□□□ -0.18
Ebf1Q07802 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ebf1Q07802 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ebf1Q07802 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ebf1Q07802 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ebf1Q07802 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ebf1Q07802 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ebf1Q07802 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ebf1Q07802 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Ebf1Q07802 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ebf1Q07802 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ebf1Q07802 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ebf1Q07802 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Ebf1Q07802 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ebf1Q07802 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ebf1Q07802 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ebf1Q07802 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ebf1Q07802 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ebf1Q07802 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Ebf1Q07802 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.89□□□□□ -0.19
Ebf1Q07802 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ebf1Q07802 Gm12928-201ENSMUST00000117115 573 ntBASIC13.89□□□□□ -0.19
Ebf1Q07802 Gm14660-201ENSMUST00000119809 575 ntBASIC13.89□□□□□ -0.19
Ebf1Q07802 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.89□□□□□ -0.19
Ebf1Q07802 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ebf1Q07802 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.89□□□□□ -0.19
Ebf1Q07802 Rassf8-202ENSMUST00000058538 1131 ntBASIC13.89□□□□□ -0.19
Ebf1Q07802 Gm10478-201ENSMUST00000084451 396 ntBASIC13.89□□□□□ -0.19
Ebf1Q07802 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.89□□□□□ -0.19
Ebf1Q07802 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Ebf1Q07802 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ebf1Q07802 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ebf1Q07802 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ebf1Q07802 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Ebf1Q07802 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ebf1Q07802 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.89□□□□□ -0.19
Ebf1Q07802 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ebf1Q07802 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ebf1Q07802 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ebf1Q07802 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ebf1Q07802 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Ebf1Q07802 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Ebf1Q07802 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ebf1Q07802 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ebf1Q07802 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ebf1Q07802 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ebf1Q07802 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ebf1Q07802 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ebf1Q07802 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.88□□□□□ -0.19
Ebf1Q07802 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13.88□□□□□ -0.19
Ebf1Q07802 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Ebf1Q07802 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ebf1Q07802 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
Ebf1Q07802 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ebf1Q07802 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ebf1Q07802 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ebf1Q07802 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ebf1Q07802 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ebf1Q07802 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ebf1Q07802 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ebf1Q07802 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ebf1Q07802 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.88□□□□□ -0.19
Ebf1Q07802 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ebf1Q07802 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ebf1Q07802 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ebf1Q07802 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ebf1Q07802 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ebf1Q07802 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ebf1Q07802 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.88□□□□□ -0.19
Ebf1Q07802 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.88□□□□□ -0.19
Ebf1Q07802 Gm27847-201ENSMUST00000183711 107 ntBASIC13.88□□□□□ -0.19
Ebf1Q07802 Gm27375-201ENSMUST00000183799 107 ntBASIC13.88□□□□□ -0.19
Ebf1Q07802 Gm42693-201ENSMUST00000196779 631 ntBASIC13.88□□□□□ -0.19
Ebf1Q07802 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ebf1Q07802 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.88□□□□□ -0.19
Ebf1Q07802 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.88□□□□□ -0.19
Ebf1Q07802 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.88□□□□□ -0.19
Ebf1Q07802 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ebf1Q07802 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ebf1Q07802 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ebf1Q07802 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ebf1Q07802 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ebf1Q07802 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.88□□□□□ -0.19
Ebf1Q07802 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ebf1Q07802 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ebf1Q07802 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
Ebf1Q07802 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ebf1Q07802 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Ebf1Q07802 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ebf1Q07802 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ebf1Q07802 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ebf1Q07802 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ebf1Q07802 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.88□□□□□ -0.19
Ebf1Q07802 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.88□□□□□ -0.19
Ebf1Q07802 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ebf1Q07802 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ebf1Q07802 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ebf1Q07802 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms