Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Hspg2Q05793 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC9.83□□□□□ -0.84
Hspg2Q05793 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Hspg2Q05793 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Hspg2Q05793 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Hspg2Q05793 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Hspg2Q05793 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Hspg2Q05793 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Hspg2Q05793 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Hspg2Q05793 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Hspg2Q05793 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Hspg2Q05793 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Hspg2Q05793 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Hspg2Q05793 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC9.83□□□□□ -0.84
Hspg2Q05793 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Hspg2Q05793 Gm20392-201ENSMUST00000173047 701 ntBASIC9.83□□□□□ -0.84
Hspg2Q05793 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Hspg2Q05793 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC9.83□□□□□ -0.84
Hspg2Q05793 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC9.83□□□□□ -0.84
Hspg2Q05793 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC9.83□□□□□ -0.84
Hspg2Q05793 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC9.83□□□□□ -0.84
Hspg2Q05793 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
Hspg2Q05793 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Hspg2Q05793 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Hspg2Q05793 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Hspg2Q05793 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Hspg2Q05793 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Hspg2Q05793 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Hspg2Q05793 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Hspg2Q05793 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Hspg2Q05793 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Hspg2Q05793 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Hspg2Q05793 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Hspg2Q05793 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC9.83□□□□□ -0.84
Hspg2Q05793 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Hspg2Q05793 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Hspg2Q05793 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC9.83□□□□□ -0.84
Hspg2Q05793 Gm14665-201ENSMUST00000122294 557 ntBASIC9.83□□□□□ -0.84
Hspg2Q05793 Gm11978-201ENSMUST00000122315 466 ntBASIC9.83□□□□□ -0.84
Hspg2Q05793 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Hspg2Q05793 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
Hspg2Q05793 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC9.83□□□□□ -0.84
Hspg2Q05793 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Hspg2Q05793 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Hspg2Q05793 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC9.83□□□□□ -0.84
Hspg2Q05793 Gm32025-201ENSMUST00000217960 307 ntBASIC9.83□□□□□ -0.84
Hspg2Q05793 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Hspg2Q05793 Gm38049-201ENSMUST00000195698 1372 ntBASIC9.83□□□□□ -0.84
Hspg2Q05793 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC9.83□□□□□ -0.84
Hspg2Q05793 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Hspg2Q05793 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Hspg2Q05793 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC9.83□□□□□ -0.84
Hspg2Q05793 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Hspg2Q05793 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Hspg2Q05793 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Hspg2Q05793 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Hspg2Q05793 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC9.82□□□□□ -0.84
Hspg2Q05793 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Hspg2Q05793 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Hspg2Q05793 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Hspg2Q05793 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC9.82□□□□□ -0.84
Hspg2Q05793 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Hspg2Q05793 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC9.82□□□□□ -0.84
Hspg2Q05793 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC9.82□□□□□ -0.84
Hspg2Q05793 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Hspg2Q05793 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Hspg2Q05793 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Hspg2Q05793 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Hspg2Q05793 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC9.82□□□□□ -0.84
Hspg2Q05793 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Hspg2Q05793 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Hspg2Q05793 Mir698-201ENSMUST00000102164 109 ntBASIC9.82□□□□□ -0.84
Hspg2Q05793 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Hspg2Q05793 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Hspg2Q05793 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Hspg2Q05793 Gm37905-201ENSMUST00000195310 341 ntBASIC9.82□□□□□ -0.84
Hspg2Q05793 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Hspg2Q05793 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Hspg2Q05793 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Hspg2Q05793 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Hspg2Q05793 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Hspg2Q05793 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Hspg2Q05793 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Hspg2Q05793 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Hspg2Q05793 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Hspg2Q05793 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Hspg2Q05793 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Hspg2Q05793 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Hspg2Q05793 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Hspg2Q05793 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC9.82□□□□□ -0.84
Hspg2Q05793 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Hspg2Q05793 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC9.82□□□□□ -0.84
Hspg2Q05793 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Hspg2Q05793 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC9.82□□□□□ -0.84
Hspg2Q05793 Gm12403-201ENSMUST00000121384 959 ntBASIC9.82□□□□□ -0.84
Hspg2Q05793 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC9.82□□□□□ -0.84
Hspg2Q05793 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC9.82□□□□□ -0.84
Hspg2Q05793 Gm4335-201ENSMUST00000182581 1004 ntBASIC9.82□□□□□ -0.84
Hspg2Q05793 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Hspg2Q05793 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms