Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Psmb5-202ENSMUST00000227257 622 ntBASIC11.76□□□□□ -0.53
Smn1P97801 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smn1P97801 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Smn1P97801 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Smn1P97801 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Smn1P97801 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smn1P97801 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smn1P97801 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Smn1P97801 Gm42934-201ENSMUST00000196920 1345 ntBASIC11.76□□□□□ -0.53
Smn1P97801 Zkscan14-203ENSMUST00000198959 2243 ntBASIC11.76□□□□□ -0.53
Smn1P97801 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Smn1P97801 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smn1P97801 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smn1P97801 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
Smn1P97801 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Smn1P97801 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Smn1P97801 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smn1P97801 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Smn1P97801 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Smn1P97801 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smn1P97801 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smn1P97801 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Smn1P97801 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Smn1P97801 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smn1P97801 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smn1P97801 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smn1P97801 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smn1P97801 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smn1P97801 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Smn1P97801 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smn1P97801 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Smn1P97801 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
Smn1P97801 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Smn1P97801 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smn1P97801 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smn1P97801 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC11.75□□□□□ -0.53
Smn1P97801 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC11.75□□□□□ -0.53
Smn1P97801 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smn1P97801 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Smn1P97801 AA543401-201ENSMUST00000164248 1269 ntBASIC11.75□□□□□ -0.53
Smn1P97801 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Smn1P97801 AC090659.1-201ENSMUST00000224334 768 ntBASIC11.75□□□□□ -0.53
Smn1P97801 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smn1P97801 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smn1P97801 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Smn1P97801 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Smn1P97801 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Smn1P97801 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smn1P97801 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smn1P97801 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smn1P97801 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smn1P97801 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Smn1P97801 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smn1P97801 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Smn1P97801 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smn1P97801 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smn1P97801 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smn1P97801 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smn1P97801 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smn1P97801 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smn1P97801 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smn1P97801 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smn1P97801 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smn1P97801 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Smn1P97801 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smn1P97801 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smn1P97801 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smn1P97801 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smn1P97801 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smn1P97801 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Smn1P97801 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smn1P97801 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.74□□□□□ -0.53
Smn1P97801 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Smn1P97801 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smn1P97801 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.74□□□□□ -0.53
Smn1P97801 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smn1P97801 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smn1P97801 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smn1P97801 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smn1P97801 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smn1P97801 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smn1P97801 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smn1P97801 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC11.74□□□□□ -0.53
Smn1P97801 Gm13823-201ENSMUST00000119930 345 ntBASIC11.74□□□□□ -0.53
Smn1P97801 Gm12017-201ENSMUST00000122453 1003 ntBASIC11.74□□□□□ -0.53
Smn1P97801 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smn1P97801 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smn1P97801 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smn1P97801 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC11.74□□□□□ -0.53
Smn1P97801 Gm3809-201ENSMUST00000180973 1006 ntBASIC11.74□□□□□ -0.53
Smn1P97801 Gm29741-201ENSMUST00000192667 421 ntBASIC11.74□□□□□ -0.53
Smn1P97801 AC158529.1-201ENSMUST00000223618 239 ntBASIC11.74□□□□□ -0.53
Smn1P97801 AC130671.1-201ENSMUST00000227384 1237 ntBASIC11.74□□□□□ -0.53
Smn1P97801 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smn1P97801 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smn1P97801 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smn1P97801 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC11.74□□□□□ -0.53
Smn1P97801 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Smn1P97801 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Smn1P97801 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms