Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.25□□□□□ -0.45
SgcbP82349 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcbP82349 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcbP82349 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcbP82349 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcbP82349 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
SgcbP82349 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
SgcbP82349 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
SgcbP82349 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcbP82349 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcbP82349 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcbP82349 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcbP82349 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.25□□□□□ -0.45
SgcbP82349 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcbP82349 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcbP82349 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcbP82349 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcbP82349 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcbP82349 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SgcbP82349 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
SgcbP82349 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SgcbP82349 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SgcbP82349 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SgcbP82349 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SgcbP82349 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SgcbP82349 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
SgcbP82349 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SgcbP82349 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
SgcbP82349 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SgcbP82349 Gm14716-201ENSMUST00000120138 718 ntBASIC12.24□□□□□ -0.45
SgcbP82349 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SgcbP82349 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
SgcbP82349 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SgcbP82349 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.24□□□□□ -0.45
SgcbP82349 Gm28631-201ENSMUST00000190740 334 ntBASIC12.24□□□□□ -0.45
SgcbP82349 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SgcbP82349 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC12.24□□□□□ -0.45
SgcbP82349 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.24□□□□□ -0.45
SgcbP82349 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
SgcbP82349 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SgcbP82349 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SgcbP82349 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
SgcbP82349 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
SgcbP82349 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SgcbP82349 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
SgcbP82349 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SgcbP82349 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SgcbP82349 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SgcbP82349 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SgcbP82349 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SgcbP82349 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SgcbP82349 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SgcbP82349 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.23□□□□□ -0.45
SgcbP82349 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SgcbP82349 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SgcbP82349 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SgcbP82349 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
SgcbP82349 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.23□□□□□ -0.45
SgcbP82349 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SgcbP82349 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
SgcbP82349 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
SgcbP82349 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SgcbP82349 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SgcbP82349 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
SgcbP82349 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SgcbP82349 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SgcbP82349 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.23□□□□□ -0.45
SgcbP82349 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.23□□□□□ -0.45
SgcbP82349 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
SgcbP82349 Gm37917-201ENSMUST00000194711 392 ntBASIC12.23□□□□□ -0.45
SgcbP82349 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.23□□□□□ -0.45
SgcbP82349 Gm5279-201ENSMUST00000199575 745 ntBASIC12.23□□□□□ -0.45
SgcbP82349 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.23□□□□□ -0.45
SgcbP82349 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.23□□□□□ -0.45
SgcbP82349 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SgcbP82349 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.23□□□□□ -0.45
SgcbP82349 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SgcbP82349 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SgcbP82349 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SgcbP82349 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SgcbP82349 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SgcbP82349 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
SgcbP82349 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SgcbP82349 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SgcbP82349 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
SgcbP82349 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SgcbP82349 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcbP82349 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.22□□□□□ -0.45
SgcbP82349 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcbP82349 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SgcbP82349 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.22□□□□□ -0.45
SgcbP82349 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcbP82349 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcbP82349 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcbP82349 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcbP82349 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
SgcbP82349 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcbP82349 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcbP82349 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.22□□□□□ -0.45
SgcbP82349 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms