Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm3P62311 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC12.47□□□□□ -0.41
Lsm3P62311 Gm4535-201ENSMUST00000182274 558 ntBASIC12.47□□□□□ -0.41
Lsm3P62311 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC12.47□□□□□ -0.41
Lsm3P62311 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.47□□□□□ -0.41
Lsm3P62311 Gm43935-201ENSMUST00000203569 1050 ntBASIC12.47□□□□□ -0.41
Lsm3P62311 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC12.47□□□□□ -0.41
Lsm3P62311 Otx2os1-206ENSMUST00000228153 787 ntBASIC12.47□□□□□ -0.41
Lsm3P62311 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm3P62311 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm3P62311 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm3P62311 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC12.47□□□□□ -0.41
Lsm3P62311 Spr-ps1-201ENSMUST00000089584 605 ntBASIC12.47□□□□□ -0.41
Lsm3P62311 Gm10355-201ENSMUST00000097146 517 ntBASIC12.47□□□□□ -0.41
Lsm3P62311 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm3P62311 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm3P62311 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm3P62311 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm3P62311 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm3P62311 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm3P62311 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm3P62311 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm3P62311 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.47□□□□□ -0.41
Lsm3P62311 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Lsm3P62311 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm3P62311 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm3P62311 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm3P62311 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm3P62311 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm3P62311 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm3P62311 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm3P62311 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm3P62311 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm3P62311 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm3P62311 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm3P62311 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm3P62311 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm3P62311 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm3P62311 Gm3928-201ENSMUST00000121141 1307 ntBASIC12.46□□□□□ -0.41
Lsm3P62311 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm3P62311 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.46□□□□□ -0.41
Lsm3P62311 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm3P62311 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm3P62311 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.46□□□□□ -0.41
Lsm3P62311 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm3P62311 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.46□□□□□ -0.41
Lsm3P62311 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm3P62311 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm3P62311 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.41
Lsm3P62311 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC12.46□□□□□ -0.41
Lsm3P62311 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC12.46□□□□□ -0.41
Lsm3P62311 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Lsm3P62311 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.46□□□□□ -0.41
Lsm3P62311 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC12.46□□□□□ -0.41
Lsm3P62311 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm3P62311 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm3P62311 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm3P62311 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Lsm3P62311 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm3P62311 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.46□□□□□ -0.42
Lsm3P62311 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lsm3P62311 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.42
Lsm3P62311 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Lsm3P62311 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lsm3P62311 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Lsm3P62311 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Lsm3P62311 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm3P62311 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm3P62311 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm3P62311 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm3P62311 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm3P62311 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm3P62311 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm3P62311 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm3P62311 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
Lsm3P62311 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm3P62311 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm3P62311 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Lsm3P62311 Gm13418-201ENSMUST00000119097 944 ntBASIC12.45□□□□□ -0.42
Lsm3P62311 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm3P62311 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Lsm3P62311 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm3P62311 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.45□□□□□ -0.42
Lsm3P62311 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Lsm3P62311 Gm10275-202ENSMUST00000168697 495 ntBASIC12.45□□□□□ -0.42
Lsm3P62311 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.45□□□□□ -0.42
Lsm3P62311 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Lsm3P62311 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Lsm3P62311 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC12.45□□□□□ -0.42
Lsm3P62311 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC12.45□□□□□ -0.42
Lsm3P62311 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm3P62311 Gm45747-201ENSMUST00000212203 999 ntBASIC12.45□□□□□ -0.42
Lsm3P62311 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm3P62311 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm3P62311 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC12.45□□□□□ -0.42
Lsm3P62311 Gm10275-201ENSMUST00000092620 635 ntBASIC12.45□□□□□ -0.42
Lsm3P62311 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm3P62311 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm3P62311 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm3P62311 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms