Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sf3b6P59708 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Sf3b6P59708 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sf3b6P59708 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Sf3b6P59708 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Sf3b6P59708 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sf3b6P59708 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sf3b6P59708 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sf3b6P59708 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Sf3b6P59708 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sf3b6P59708 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sf3b6P59708 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.18□□□□□ -0.46
Sf3b6P59708 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sf3b6P59708 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sf3b6P59708 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.18□□□□□ -0.46
Sf3b6P59708 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sf3b6P59708 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.18□□□□□ -0.46
Sf3b6P59708 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sf3b6P59708 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.18□□□□□ -0.46
Sf3b6P59708 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sf3b6P59708 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sf3b6P59708 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sf3b6P59708 BC001981-202ENSMUST00000191393 1545 ntBASIC12.18□□□□□ -0.46
Sf3b6P59708 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sf3b6P59708 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Sf3b6P59708 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Sf3b6P59708 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sf3b6P59708 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sf3b6P59708 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.18□□□□□ -0.46
Sf3b6P59708 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
Sf3b6P59708 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sf3b6P59708 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sf3b6P59708 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sf3b6P59708 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sf3b6P59708 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sf3b6P59708 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sf3b6P59708 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sf3b6P59708 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sf3b6P59708 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sf3b6P59708 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Sf3b6P59708 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sf3b6P59708 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sf3b6P59708 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Sf3b6P59708 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.18□□□□□ -0.46
Sf3b6P59708 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sf3b6P59708 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sf3b6P59708 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.18□□□□□ -0.46
Sf3b6P59708 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sf3b6P59708 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sf3b6P59708 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sf3b6P59708 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Sf3b6P59708 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Sf3b6P59708 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sf3b6P59708 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sf3b6P59708 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3b6P59708 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3b6P59708 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3b6P59708 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3b6P59708 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Sf3b6P59708 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3b6P59708 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Sf3b6P59708 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3b6P59708 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3b6P59708 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3b6P59708 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3b6P59708 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC12.17□□□□□ -0.46
Sf3b6P59708 Rpph1-201ENSMUST00000175096 319 ntBASIC12.17□□□□□ -0.46
Sf3b6P59708 Gm27702-201ENSMUST00000184512 56 ntBASIC12.17□□□□□ -0.46
Sf3b6P59708 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3b6P59708 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3b6P59708 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.17□□□□□ -0.46
Sf3b6P59708 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3b6P59708 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Sf3b6P59708 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.17□□□□□ -0.46
Sf3b6P59708 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3b6P59708 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3b6P59708 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3b6P59708 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3b6P59708 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3b6P59708 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
Sf3b6P59708 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3b6P59708 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3b6P59708 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3b6P59708 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3b6P59708 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3b6P59708 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3b6P59708 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3b6P59708 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.17□□□□□ -0.46
Sf3b6P59708 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Sf3b6P59708 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sf3b6P59708 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sf3b6P59708 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sf3b6P59708 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sf3b6P59708 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sf3b6P59708 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sf3b6P59708 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sf3b6P59708 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Sf3b6P59708 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sf3b6P59708 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC12.16□□□□□ -0.46
Sf3b6P59708 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms