Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC18.39■□□□□ 0.53
Nphp4P59240 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC18.39■□□□□ 0.53
Nphp4P59240 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC18.39■□□□□ 0.53
Nphp4P59240 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nphp4P59240 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nphp4P59240 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nphp4P59240 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Nphp4P59240 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nphp4P59240 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nphp4P59240 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Nphp4P59240 Gm2231-201ENSMUST00000125661 612 ntBASIC18.39■□□□□ 0.53
Nphp4P59240 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nphp4P59240 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC18.39■□□□□ 0.53
Nphp4P59240 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nphp4P59240 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nphp4P59240 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nphp4P59240 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nphp4P59240 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nphp4P59240 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Nphp4P59240 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nphp4P59240 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nphp4P59240 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nphp4P59240 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Nphp4P59240 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nphp4P59240 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nphp4P59240 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nphp4P59240 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nphp4P59240 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC18.38■□□□□ 0.53
Nphp4P59240 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC18.38■□□□□ 0.53
Nphp4P59240 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nphp4P59240 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nphp4P59240 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nphp4P59240 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nphp4P59240 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
Nphp4P59240 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Nphp4P59240 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Nphp4P59240 Gm11658-201ENSMUST00000120913 1008 ntBASIC18.38■□□□□ 0.53
Nphp4P59240 Gm6161-201ENSMUST00000121942 1102 ntBASIC18.38■□□□□ 0.53
Nphp4P59240 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC18.38■□□□□ 0.53
Nphp4P59240 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nphp4P59240 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nphp4P59240 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Nphp4P59240 Gm6254-201ENSMUST00000168178 1072 ntBASIC18.38■□□□□ 0.53
Nphp4P59240 Gm6153-201ENSMUST00000172004 1058 ntBASIC18.38■□□□□ 0.53
Nphp4P59240 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Nphp4P59240 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nphp4P59240 Gm2467-201ENSMUST00000182266 1010 ntBASIC18.38■□□□□ 0.53
Nphp4P59240 Gm6981-201ENSMUST00000182467 1008 ntBASIC18.38■□□□□ 0.53
Nphp4P59240 Gm37008-201ENSMUST00000195712 319 ntBASIC18.38■□□□□ 0.53
Nphp4P59240 Gm5641-202ENSMUST00000198699 1080 ntBASIC18.38■□□□□ 0.53
Nphp4P59240 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC18.38■□□□□ 0.53
Nphp4P59240 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nphp4P59240 Gm45880-201ENSMUST00000213041 853 ntBASIC18.38■□□□□ 0.53
Nphp4P59240 Gm45930-201ENSMUST00000221330 292 ntBASIC18.38■□□□□ 0.53
Nphp4P59240 AC154462.2-201ENSMUST00000227519 370 ntBASIC18.38■□□□□ 0.53
Nphp4P59240 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nphp4P59240 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nphp4P59240 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nphp4P59240 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nphp4P59240 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nphp4P59240 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Nphp4P59240 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nphp4P59240 Gm10729-202ENSMUST00000193403 1375 ntBASIC18.38■□□□□ 0.53
Nphp4P59240 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nphp4P59240 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nphp4P59240 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nphp4P59240 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Nphp4P59240 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nphp4P59240 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nphp4P59240 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Nphp4P59240 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nphp4P59240 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Nphp4P59240 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nphp4P59240 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nphp4P59240 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC18.37■□□□□ 0.53
Nphp4P59240 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC18.37■□□□□ 0.53
Nphp4P59240 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nphp4P59240 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC18.37■□□□□ 0.53
Nphp4P59240 Gm5896-201ENSMUST00000189662 1024 ntBASIC18.37■□□□□ 0.53
Nphp4P59240 Gm18244-201ENSMUST00000219747 1566 ntBASIC18.37■□□□□ 0.53
Nphp4P59240 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nphp4P59240 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nphp4P59240 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nphp4P59240 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nphp4P59240 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nphp4P59240 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nphp4P59240 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nphp4P59240 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nphp4P59240 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nphp4P59240 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Nphp4P59240 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC18.36■□□□□ 0.53
Nphp4P59240 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nphp4P59240 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Nphp4P59240 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Nphp4P59240 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nphp4P59240 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nphp4P59240 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Nphp4P59240 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nphp4P59240 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Nphp4P59240 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms