Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup43P59235 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nup43P59235 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.97□□□□□ -0.33
Nup43P59235 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nup43P59235 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nup43P59235 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup43P59235 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup43P59235 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nup43P59235 Gm27772-201ENSMUST00000184900 187 ntBASIC12.97□□□□□ -0.33
Nup43P59235 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.97□□□□□ -0.33
Nup43P59235 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.97□□□□□ -0.33
Nup43P59235 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.97□□□□□ -0.33
Nup43P59235 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.97□□□□□ -0.33
Nup43P59235 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup43P59235 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup43P59235 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.97□□□□□ -0.33
Nup43P59235 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Nup43P59235 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Nup43P59235 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup43P59235 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup43P59235 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.97□□□□□ -0.33
Nup43P59235 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.97□□□□□ -0.33
Nup43P59235 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nup43P59235 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup43P59235 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup43P59235 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup43P59235 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup43P59235 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup43P59235 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup43P59235 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup43P59235 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.97□□□□□ -0.33
Nup43P59235 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup43P59235 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Nup43P59235 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup43P59235 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup43P59235 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup43P59235 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nup43P59235 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup43P59235 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nup43P59235 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Nup43P59235 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Nup43P59235 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Nup43P59235 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.96□□□□□ -0.33
Nup43P59235 Gm5279-201ENSMUST00000199575 745 ntBASIC12.96□□□□□ -0.33
Nup43P59235 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.96□□□□□ -0.33
Nup43P59235 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup43P59235 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup43P59235 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nup43P59235 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup43P59235 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup43P59235 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Nup43P59235 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup43P59235 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Nup43P59235 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Nup43P59235 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.96□□□□□ -0.33
Nup43P59235 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup43P59235 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Nup43P59235 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nup43P59235 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nup43P59235 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Nup43P59235 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.95□□□□□ -0.34
Nup43P59235 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Nup43P59235 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Nup43P59235 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Nup43P59235 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nup43P59235 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Nup43P59235 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup43P59235 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup43P59235 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Nup43P59235 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup43P59235 Gm7488-201ENSMUST00000117148 684 ntBASIC12.95□□□□□ -0.34
Nup43P59235 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.95□□□□□ -0.34
Nup43P59235 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nup43P59235 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup43P59235 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nup43P59235 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.95□□□□□ -0.34
Nup43P59235 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.95□□□□□ -0.34
Nup43P59235 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup43P59235 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup43P59235 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup43P59235 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.95□□□□□ -0.34
Nup43P59235 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup43P59235 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Nup43P59235 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup43P59235 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup43P59235 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Nup43P59235 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.95□□□□□ -0.34
Nup43P59235 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup43P59235 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
Nup43P59235 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup43P59235 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup43P59235 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup43P59235 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nup43P59235 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Nup43P59235 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.94□□□□□ -0.34
Nup43P59235 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup43P59235 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup43P59235 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nup43P59235 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nup43P59235 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms