Protein–RNA interactions for Protein: P58466

Ctdsp1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1P58466 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Ctdsp1P58466 Gm45747-201ENSMUST00000212203 999 ntBASIC10.68□□□□□ -0.7
Ctdsp1P58466 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ctdsp1P58466 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Ctdsp1P58466 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ctdsp1P58466 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ctdsp1P58466 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ctdsp1P58466 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ctdsp1P58466 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ctdsp1P58466 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ctdsp1P58466 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ctdsp1P58466 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ctdsp1P58466 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ctdsp1P58466 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC10.68□□□□□ -0.7
Ctdsp1P58466 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ctdsp1P58466 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ctdsp1P58466 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ctdsp1P58466 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ctdsp1P58466 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
Ctdsp1P58466 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ctdsp1P58466 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ctdsp1P58466 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Ctdsp1P58466 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ctdsp1P58466 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ctdsp1P58466 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ctdsp1P58466 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Ctdsp1P58466 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ctdsp1P58466 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Ctdsp1P58466 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ctdsp1P58466 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ctdsp1P58466 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ctdsp1P58466 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ctdsp1P58466 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ctdsp1P58466 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ctdsp1P58466 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ctdsp1P58466 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ctdsp1P58466 AC130669.1-201ENSMUST00000228537 1672 ntBASIC10.67□□□□□ -0.7
Ctdsp1P58466 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Ctdsp1P58466 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ctdsp1P58466 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ctdsp1P58466 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Ctdsp1P58466 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ctdsp1P58466 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ctdsp1P58466 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC10.67□□□□□ -0.7
Ctdsp1P58466 Arhgef33-211ENSMUST00000225658 473 ntBASIC10.67□□□□□ -0.7
Ctdsp1P58466 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ctdsp1P58466 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ctdsp1P58466 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ctdsp1P58466 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
Ctdsp1P58466 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ctdsp1P58466 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ctdsp1P58466 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ctdsp1P58466 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ctdsp1P58466 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ctdsp1P58466 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ctdsp1P58466 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ctdsp1P58466 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Ctdsp1P58466 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ctdsp1P58466 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ctdsp1P58466 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ctdsp1P58466 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ctdsp1P58466 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ctdsp1P58466 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ctdsp1P58466 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC10.67□□□□□ -0.7
Ctdsp1P58466 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ctdsp1P58466 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ctdsp1P58466 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Ctdsp1P58466 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ctdsp1P58466 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ctdsp1P58466 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ctdsp1P58466 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ctdsp1P58466 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Ctdsp1P58466 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ctdsp1P58466 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ctdsp1P58466 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ctdsp1P58466 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Ctdsp1P58466 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ctdsp1P58466 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC10.66□□□□□ -0.7
Ctdsp1P58466 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ctdsp1P58466 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ctdsp1P58466 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ctdsp1P58466 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ctdsp1P58466 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ctdsp1P58466 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ctdsp1P58466 Gm4780-202ENSMUST00000215200 2644 ntBASIC10.66□□□□□ -0.7
Ctdsp1P58466 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ctdsp1P58466 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ctdsp1P58466 AC137842.1-201ENSMUST00000227896 2064 ntBASIC10.66□□□□□ -0.7
Ctdsp1P58466 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ctdsp1P58466 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ctdsp1P58466 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ctdsp1P58466 Gm10275-202ENSMUST00000168697 495 ntBASIC10.66□□□□□ -0.7
Ctdsp1P58466 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC10.66□□□□□ -0.7
Ctdsp1P58466 Gm43799-201ENSMUST00000201845 579 ntBASIC10.66□□□□□ -0.7
Ctdsp1P58466 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC10.66□□□□□ -0.7
Ctdsp1P58466 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC10.66□□□□□ -0.7
Ctdsp1P58466 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC10.66□□□□□ -0.7
Ctdsp1P58466 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ctdsp1P58466 Gm10275-201ENSMUST00000092620 635 ntBASIC10.66□□□□□ -0.7
Ctdsp1P58466 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms