Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Fdft1P53798 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Fdft1P53798 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Fdft1P53798 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Fdft1P53798 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Fdft1P53798 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.74□□□□□ -0.21
Fdft1P53798 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Fdft1P53798 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Fdft1P53798 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Fdft1P53798 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Fdft1P53798 Gm12428-201ENSMUST00000119844 727 ntBASIC13.74□□□□□ -0.21
Fdft1P53798 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Fdft1P53798 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.74□□□□□ -0.21
Fdft1P53798 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.74□□□□□ -0.21
Fdft1P53798 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.74□□□□□ -0.21
Fdft1P53798 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Fdft1P53798 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Fdft1P53798 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.74□□□□□ -0.21
Fdft1P53798 Gm18027-201ENSMUST00000218947 619 ntBASIC13.74□□□□□ -0.21
Fdft1P53798 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Fdft1P53798 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.74□□□□□ -0.21
Fdft1P53798 Shd-206ENSMUST00000225145 998 ntBASIC13.74□□□□□ -0.21
Fdft1P53798 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Fdft1P53798 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Fdft1P53798 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Fdft1P53798 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.74□□□□□ -0.21
Fdft1P53798 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Fdft1P53798 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.74□□□□□ -0.21
Fdft1P53798 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.74□□□□□ -0.21
Fdft1P53798 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Fdft1P53798 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Fdft1P53798 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.74□□□□□ -0.21
Fdft1P53798 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Fdft1P53798 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Fdft1P53798 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Fdft1P53798 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Fdft1P53798 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Fdft1P53798 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Fdft1P53798 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Fdft1P53798 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Fdft1P53798 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Fdft1P53798 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Fdft1P53798 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.73□□□□□ -0.21
Fdft1P53798 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Fdft1P53798 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Fdft1P53798 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.73□□□□□ -0.21
Fdft1P53798 Gm22175-201ENSMUST00000175007 78 ntBASIC13.73□□□□□ -0.21
Fdft1P53798 Gm27533-201ENSMUST00000183800 152 ntBASIC13.73□□□□□ -0.21
Fdft1P53798 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.73□□□□□ -0.21
Fdft1P53798 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.73□□□□□ -0.21
Fdft1P53798 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
Fdft1P53798 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Fdft1P53798 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Fdft1P53798 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.73□□□□□ -0.21
Fdft1P53798 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Fdft1P53798 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Fdft1P53798 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.73□□□□□ -0.21
Fdft1P53798 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Fdft1P53798 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Fdft1P53798 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Fdft1P53798 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Fdft1P53798 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Fdft1P53798 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Fdft1P53798 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Fdft1P53798 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Fdft1P53798 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.72□□□□□ -0.21
Fdft1P53798 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Fdft1P53798 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Fdft1P53798 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Fdft1P53798 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Fdft1P53798 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Fdft1P53798 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Fdft1P53798 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Fdft1P53798 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Fdft1P53798 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Fdft1P53798 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Fdft1P53798 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Fdft1P53798 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Fdft1P53798 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Fdft1P53798 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Fdft1P53798 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Fdft1P53798 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.72□□□□□ -0.21
Fdft1P53798 Gm37714-201ENSMUST00000194742 342 ntBASIC13.72□□□□□ -0.21
Fdft1P53798 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Fdft1P53798 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.72□□□□□ -0.21
Fdft1P53798 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Fdft1P53798 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Fdft1P53798 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Fdft1P53798 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Fdft1P53798 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Fdft1P53798 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Fdft1P53798 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Fdft1P53798 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Fdft1P53798 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Fdft1P53798 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Fdft1P53798 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Fdft1P53798 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Fdft1P53798 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Fdft1P53798 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Fdft1P53798 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms