Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Sox3P53784 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox3P53784 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox3P53784 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox3P53784 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox3P53784 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox3P53784 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox3P53784 Gm42853-201ENSMUST00000201273 1387 ntBASIC13.17□□□□□ -0.3
Sox3P53784 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox3P53784 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Sox3P53784 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox3P53784 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.17□□□□□ -0.3
Sox3P53784 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox3P53784 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox3P53784 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox3P53784 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Sox3P53784 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox3P53784 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Sox3P53784 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sox3P53784 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Sox3P53784 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sox3P53784 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox3P53784 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Sox3P53784 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Sox3P53784 Gm12341-201ENSMUST00000119724 503 ntBASIC13.16□□□□□ -0.3
Sox3P53784 Gm12329-201ENSMUST00000120829 1007 ntBASIC13.16□□□□□ -0.3
Sox3P53784 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sox3P53784 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox3P53784 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sox3P53784 Gm5354-201ENSMUST00000182417 973 ntBASIC13.16□□□□□ -0.3
Sox3P53784 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.16□□□□□ -0.3
Sox3P53784 Gm44974-201ENSMUST00000206387 1279 ntBASIC13.16□□□□□ -0.3
Sox3P53784 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Sox3P53784 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.16□□□□□ -0.3
Sox3P53784 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox3P53784 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox3P53784 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sox3P53784 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox3P53784 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox3P53784 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox3P53784 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox3P53784 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.16□□□□□ -0.3
Sox3P53784 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
Sox3P53784 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox3P53784 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox3P53784 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sox3P53784 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox3P53784 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sox3P53784 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox3P53784 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox3P53784 Gm11661-201ENSMUST00000121761 1327 ntBASIC13.15□□□□□ -0.3
Sox3P53784 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Sox3P53784 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox3P53784 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.15□□□□□ -0.3
Sox3P53784 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox3P53784 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox3P53784 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox3P53784 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sox3P53784 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox3P53784 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox3P53784 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sox3P53784 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Sox3P53784 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox3P53784 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.15□□□□□ -0.3
Sox3P53784 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox3P53784 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox3P53784 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.15□□□□□ -0.3
Sox3P53784 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sox3P53784 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC13.15□□□□□ -0.3
Sox3P53784 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.15□□□□□ -0.3
Sox3P53784 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Sox3P53784 Gm6244-201ENSMUST00000178732 841 ntBASIC13.15□□□□□ -0.3
Sox3P53784 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC13.15□□□□□ -0.3
Sox3P53784 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.15□□□□□ -0.3
Sox3P53784 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sox3P53784 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.15□□□□□ -0.3
Sox3P53784 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sox3P53784 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sox3P53784 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13.15□□□□□ -0.3
Sox3P53784 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC13.15□□□□□ -0.3
Sox3P53784 CT009713.10-202ENSMUST00000225734 696 ntBASIC13.15□□□□□ -0.3
Sox3P53784 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox3P53784 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Sox3P53784 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox3P53784 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox3P53784 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sox3P53784 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox3P53784 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox3P53784 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sox3P53784 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox3P53784 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Sox3P53784 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox3P53784 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox3P53784 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Sox3P53784 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Sox3P53784 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
Sox3P53784 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sox3P53784 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sox3P53784 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox3P53784 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms