Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hmga2P52927 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Hmga2P52927 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hmga2P52927 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Hmga2P52927 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Hmga2P52927 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Hmga2P52927 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hmga2P52927 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Hmga2P52927 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hmga2P52927 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Hmga2P52927 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Hmga2P52927 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hmga2P52927 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hmga2P52927 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Hmga2P52927 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hmga2P52927 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Hmga2P52927 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.67□□□□□ -0.54
Hmga2P52927 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.67□□□□□ -0.54
Hmga2P52927 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Hmga2P52927 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hmga2P52927 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hmga2P52927 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Hmga2P52927 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Hmga2P52927 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC11.67□□□□□ -0.54
Hmga2P52927 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hmga2P52927 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Hmga2P52927 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC11.67□□□□□ -0.54
Hmga2P52927 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC11.67□□□□□ -0.54
Hmga2P52927 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC11.67□□□□□ -0.54
Hmga2P52927 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Hmga2P52927 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC11.67□□□□□ -0.54
Hmga2P52927 Gm37714-201ENSMUST00000194742 342 ntBASIC11.67□□□□□ -0.54
Hmga2P52927 Gm43073-201ENSMUST00000198200 1189 ntBASIC11.67□□□□□ -0.54
Hmga2P52927 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC11.67□□□□□ -0.54
Hmga2P52927 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.67□□□□□ -0.54
Hmga2P52927 AC164629.2-201ENSMUST00000217916 270 ntBASIC11.67□□□□□ -0.54
Hmga2P52927 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Hmga2P52927 Gpr146-202ENSMUST00000053120 1040 ntBASIC11.67□□□□□ -0.54
Hmga2P52927 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hmga2P52927 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hmga2P52927 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hmga2P52927 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC11.67□□□□□ -0.54
Hmga2P52927 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hmga2P52927 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hmga2P52927 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hmga2P52927 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hmga2P52927 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hmga2P52927 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hmga2P52927 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Hmga2P52927 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hmga2P52927 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Hmga2P52927 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hmga2P52927 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.67□□□□□ -0.54
Hmga2P52927 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Hmga2P52927 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Hmga2P52927 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hmga2P52927 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Hmga2P52927 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hmga2P52927 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hmga2P52927 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hmga2P52927 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hmga2P52927 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hmga2P52927 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.66□□□□□ -0.54
Hmga2P52927 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hmga2P52927 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hmga2P52927 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hmga2P52927 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hmga2P52927 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Hmga2P52927 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hmga2P52927 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hmga2P52927 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC11.66□□□□□ -0.54
Hmga2P52927 Gm6539-201ENSMUST00000119157 1064 ntBASIC11.66□□□□□ -0.54
Hmga2P52927 Gm12017-201ENSMUST00000122453 1003 ntBASIC11.66□□□□□ -0.54
Hmga2P52927 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC11.66□□□□□ -0.54
Hmga2P52927 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Hmga2P52927 Gm38225-201ENSMUST00000194001 393 ntBASIC11.66□□□□□ -0.54
Hmga2P52927 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hmga2P52927 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Hmga2P52927 Gm10819-201ENSMUST00000099988 561 ntBASIC11.66□□□□□ -0.54
Hmga2P52927 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Hmga2P52927 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Hmga2P52927 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hmga2P52927 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Hmga2P52927 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Hmga2P52927 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
Hmga2P52927 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hmga2P52927 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.66□□□□□ -0.54
Hmga2P52927 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Hmga2P52927 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Hmga2P52927 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC11.66□□□□□ -0.54
Hmga2P52927 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Hmga2P52927 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
Hmga2P52927 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Hmga2P52927 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Hmga2P52927 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Hmga2P52927 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Hmga2P52927 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Hmga2P52927 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Hmga2P52927 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Hmga2P52927 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms