Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shmt1P50431 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shmt1P50431 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shmt1P50431 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shmt1P50431 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shmt1P50431 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shmt1P50431 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Shmt1P50431 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Shmt1P50431 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Shmt1P50431 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Shmt1P50431 Gm11918-201ENSMUST00000121660 179 ntBASIC14.49□□□□□ -0.09
Shmt1P50431 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.49□□□□□ -0.09
Shmt1P50431 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shmt1P50431 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shmt1P50431 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shmt1P50431 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shmt1P50431 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Shmt1P50431 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Shmt1P50431 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shmt1P50431 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shmt1P50431 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Shmt1P50431 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Shmt1P50431 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.49□□□□□ -0.09
Shmt1P50431 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shmt1P50431 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shmt1P50431 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shmt1P50431 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shmt1P50431 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shmt1P50431 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Shmt1P50431 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.49□□□□□ -0.09
Shmt1P50431 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shmt1P50431 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shmt1P50431 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shmt1P50431 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Shmt1P50431 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Shmt1P50431 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Shmt1P50431 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Shmt1P50431 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.48□□□□□ -0.09
Shmt1P50431 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Shmt1P50431 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Shmt1P50431 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Shmt1P50431 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Shmt1P50431 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Shmt1P50431 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Shmt1P50431 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Shmt1P50431 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Shmt1P50431 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Shmt1P50431 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Shmt1P50431 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.48□□□□□ -0.09
Shmt1P50431 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Shmt1P50431 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Shmt1P50431 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.48□□□□□ -0.09
Shmt1P50431 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.48□□□□□ -0.09
Shmt1P50431 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.48□□□□□ -0.09
Shmt1P50431 Gm28911-201ENSMUST00000188837 117 ntBASIC14.48□□□□□ -0.09
Shmt1P50431 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.48□□□□□ -0.09
Shmt1P50431 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Shmt1P50431 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.48□□□□□ -0.09
Shmt1P50431 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Shmt1P50431 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.48□□□□□ -0.09
Shmt1P50431 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Shmt1P50431 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Shmt1P50431 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Shmt1P50431 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.48□□□□□ -0.09
Shmt1P50431 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Shmt1P50431 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Shmt1P50431 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Shmt1P50431 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Shmt1P50431 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Shmt1P50431 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Shmt1P50431 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Shmt1P50431 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Shmt1P50431 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.47□□□□□ -0.09
Shmt1P50431 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Shmt1P50431 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Shmt1P50431 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Shmt1P50431 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Shmt1P50431 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Shmt1P50431 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Shmt1P50431 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Shmt1P50431 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.47□□□□□ -0.09
Shmt1P50431 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Shmt1P50431 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.47□□□□□ -0.09
Shmt1P50431 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Shmt1P50431 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC14.47□□□□□ -0.09
Shmt1P50431 Gm27701-201ENSMUST00000184498 110 ntBASIC14.47□□□□□ -0.09
Shmt1P50431 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Shmt1P50431 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Shmt1P50431 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Shmt1P50431 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Shmt1P50431 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
Shmt1P50431 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Shmt1P50431 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.47□□□□□ -0.09
Shmt1P50431 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Shmt1P50431 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Shmt1P50431 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.47□□□□□ -0.09
Shmt1P50431 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.47□□□□□ -0.09
Shmt1P50431 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Shmt1P50431 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Shmt1P50431 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 101.1 ms