Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Brca1P48754 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Brca1P48754 Gm10782-202ENSMUST00000223775 1480 ntBASIC15.11■□□□□ 0.01
Brca1P48754 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Brca1P48754 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Brca1P48754 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Brca1P48754 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Brca1P48754 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Brca1P48754 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Brca1P48754 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Brca1P48754 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC15.11■□□□□ 0.01
Brca1P48754 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Brca1P48754 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Brca1P48754 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.11■□□□□ 0.01
Brca1P48754 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Brca1P48754 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Brca1P48754 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC15.1■□□□□ 0.01
Brca1P48754 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Brca1P48754 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Brca1P48754 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC15.1■□□□□ 0.01
Brca1P48754 Gm13316-201ENSMUST00000140537 691 ntBASIC15.1■□□□□ 0.01
Brca1P48754 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC15.1■□□□□ 0.01
Brca1P48754 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC15.1■□□□□ 0.01
Brca1P48754 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Brca1P48754 Gm8176-201ENSMUST00000191297 1099 ntBASIC15.1■□□□□ 0.01
Brca1P48754 AC153974.2-201ENSMUST00000218577 1025 ntBASIC15.1■□□□□ 0.01
Brca1P48754 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Brca1P48754 Gm18556-201ENSMUST00000219748 1031 ntBASIC15.1■□□□□ 0.01
Brca1P48754 CT025533.2-201ENSMUST00000228715 1248 ntBASIC15.1■□□□□ 0.01
Brca1P48754 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.1■□□□□ 0.01
Brca1P48754 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Brca1P48754 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Brca1P48754 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Brca1P48754 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Brca1P48754 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Brca1P48754 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC15.1■□□□□ 0.01
Brca1P48754 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Brca1P48754 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Brca1P48754 Gm8862-201ENSMUST00000198379 1346 ntBASIC15.1■□□□□ 0.01
Brca1P48754 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Brca1P48754 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Brca1P48754 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Brca1P48754 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Brca1P48754 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
Brca1P48754 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
Brca1P48754 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Brca1P48754 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Brca1P48754 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Brca1P48754 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC15.1■□□□□ 0.01
Brca1P48754 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Brca1P48754 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Brca1P48754 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.09■□□□□ 0.01
Brca1P48754 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC15.09■□□□□ 0.01
Brca1P48754 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Brca1P48754 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC15.09■□□□□ 0.01
Brca1P48754 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Brca1P48754 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC15.09■□□□□ 0.01
Brca1P48754 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
Brca1P48754 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC15.09■□□□□ 0.01
Brca1P48754 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC15.09■□□□□ 0.01
Brca1P48754 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Brca1P48754 Gm31256-201ENSMUST00000194705 506 ntBASIC15.09■□□□□ 0.01
Brca1P48754 Gm43378-201ENSMUST00000199336 582 ntBASIC15.09■□□□□ 0.01
Brca1P48754 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Brca1P48754 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Brca1P48754 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Brca1P48754 Gm5846-201ENSMUST00000193146 1414 ntBASIC15.09■□□□□ 0.01
Brca1P48754 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC15.09■□□□□ 0.01
Brca1P48754 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Brca1P48754 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Brca1P48754 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Brca1P48754 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.09■□□□□ 0.01
Brca1P48754 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Brca1P48754 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Brca1P48754 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.09■□□□□ 0.01
Brca1P48754 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Brca1P48754 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Brca1P48754 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Brca1P48754 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.08■□□□□ 0.01
Brca1P48754 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Brca1P48754 Gm5523-201ENSMUST00000180415 997 ntBASIC15.08■□□□□ 0.01
Brca1P48754 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC15.08■□□□□ 0.01
Brca1P48754 Gm10109-202ENSMUST00000206890 1211 ntBASIC15.08■□□□□ 0.01
Brca1P48754 AC166051.1-201ENSMUST00000214313 210 ntBASIC15.08■□□□□ 0.01
Brca1P48754 Gm9004-201ENSMUST00000218739 1222 ntBASIC15.08■□□□□ 0.01
Brca1P48754 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC15.08■□□□□ 0.01
Brca1P48754 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Brca1P48754 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Brca1P48754 Gm10605-202ENSMUST00000183019 3198 ntBASIC15.08■□□□□ 0.01
Brca1P48754 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Brca1P48754 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Brca1P48754 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC15.08■□□□□ 0
Brca1P48754 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC15.08■□□□□ 0
Brca1P48754 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Brca1P48754 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Brca1P48754 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Brca1P48754 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.08■□□□□ 0
Brca1P48754 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.08■□□□□ 0
Brca1P48754 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Brca1P48754 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms