Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
GdnfP48540 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
GdnfP48540 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
GdnfP48540 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
GdnfP48540 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
GdnfP48540 Gm11543-201ENSMUST00000120758 370 ntBASIC12.05□□□□□ -0.48
GdnfP48540 Mir1895-201ENSMUST00000122615 79 ntBASIC12.05□□□□□ -0.48
GdnfP48540 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
GdnfP48540 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
GdnfP48540 Gm44882-201ENSMUST00000205702 802 ntBASIC12.05□□□□□ -0.48
GdnfP48540 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
GdnfP48540 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
GdnfP48540 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
GdnfP48540 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
GdnfP48540 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
GdnfP48540 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
GdnfP48540 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
GdnfP48540 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.05□□□□□ -0.48
GdnfP48540 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
GdnfP48540 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.05□□□□□ -0.48
GdnfP48540 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
GdnfP48540 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
GdnfP48540 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.05□□□□□ -0.48
GdnfP48540 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
GdnfP48540 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.04□□□□□ -0.48
GdnfP48540 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
GdnfP48540 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
GdnfP48540 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
GdnfP48540 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
GdnfP48540 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
GdnfP48540 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
GdnfP48540 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
GdnfP48540 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
GdnfP48540 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.04□□□□□ -0.48
GdnfP48540 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
GdnfP48540 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.04□□□□□ -0.48
GdnfP48540 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
GdnfP48540 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
GdnfP48540 Gm23935-201ENSMUST00000102303 57 ntBASIC12.04□□□□□ -0.48
GdnfP48540 Gm24270-201ENSMUST00000102326 57 ntBASIC12.04□□□□□ -0.48
GdnfP48540 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC12.04□□□□□ -0.48
GdnfP48540 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
GdnfP48540 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC12.04□□□□□ -0.48
GdnfP48540 Gm24245-201ENSMUST00000157318 57 ntBASIC12.04□□□□□ -0.48
GdnfP48540 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
GdnfP48540 Gm43575-201ENSMUST00000196420 516 ntBASIC12.04□□□□□ -0.48
GdnfP48540 Gm44335-201ENSMUST00000196879 141 ntBASIC12.04□□□□□ -0.48
GdnfP48540 Gm44297-201ENSMUST00000198304 141 ntBASIC12.04□□□□□ -0.48
GdnfP48540 AC151286.1-201ENSMUST00000198489 145 ntBASIC12.04□□□□□ -0.48
GdnfP48540 Gm44346-201ENSMUST00000198851 141 ntBASIC12.04□□□□□ -0.48
GdnfP48540 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.04□□□□□ -0.48
GdnfP48540 Chchd1-203ENSMUST00000224633 557 ntBASIC12.04□□□□□ -0.48
GdnfP48540 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC12.04□□□□□ -0.48
GdnfP48540 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
GdnfP48540 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
GdnfP48540 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
GdnfP48540 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
GdnfP48540 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
GdnfP48540 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
GdnfP48540 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
GdnfP48540 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.04□□□□□ -0.48
GdnfP48540 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.04□□□□□ -0.48
GdnfP48540 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
GdnfP48540 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
GdnfP48540 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
GdnfP48540 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
GdnfP48540 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
GdnfP48540 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
GdnfP48540 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
GdnfP48540 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
GdnfP48540 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
GdnfP48540 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
GdnfP48540 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
GdnfP48540 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
GdnfP48540 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
GdnfP48540 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
GdnfP48540 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.03□□□□□ -0.48
GdnfP48540 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
GdnfP48540 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
GdnfP48540 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
GdnfP48540 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
GdnfP48540 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
GdnfP48540 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.03□□□□□ -0.48
GdnfP48540 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
GdnfP48540 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
GdnfP48540 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
GdnfP48540 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
GdnfP48540 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.03□□□□□ -0.48
GdnfP48540 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
GdnfP48540 Gm2810-201ENSMUST00000118681 990 ntBASIC12.03□□□□□ -0.48
GdnfP48540 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12.03□□□□□ -0.48
GdnfP48540 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.03□□□□□ -0.48
GdnfP48540 Gm37102-201ENSMUST00000195740 1105 ntBASIC12.03□□□□□ -0.48
GdnfP48540 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
GdnfP48540 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.03□□□□□ -0.48
GdnfP48540 Gm43073-201ENSMUST00000198200 1189 ntBASIC12.03□□□□□ -0.48
GdnfP48540 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
GdnfP48540 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
GdnfP48540 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
GdnfP48540 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms