Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Sox18P43680 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sox18P43680 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox18P43680 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sox18P43680 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox18P43680 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox18P43680 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox18P43680 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox18P43680 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox18P43680 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.18□□□□□ -0.3
Sox18P43680 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Sox18P43680 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox18P43680 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox18P43680 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox18P43680 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox18P43680 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox18P43680 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox18P43680 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox18P43680 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox18P43680 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Sox18P43680 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox18P43680 Gm1335-201ENSMUST00000121653 386 ntBASIC13.18□□□□□ -0.3
Sox18P43680 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC13.18□□□□□ -0.3
Sox18P43680 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC13.18□□□□□ -0.3
Sox18P43680 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC13.18□□□□□ -0.3
Sox18P43680 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.18□□□□□ -0.3
Sox18P43680 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC13.18□□□□□ -0.3
Sox18P43680 Gm8810-201ENSMUST00000172895 754 ntBASIC13.18□□□□□ -0.3
Sox18P43680 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC13.18□□□□□ -0.3
Sox18P43680 Gm37259-201ENSMUST00000193903 849 ntBASIC13.18□□□□□ -0.3
Sox18P43680 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC13.18□□□□□ -0.3
Sox18P43680 Gm43974-201ENSMUST00000205080 684 ntBASIC13.18□□□□□ -0.3
Sox18P43680 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Sox18P43680 AC155637.1-201ENSMUST00000218560 636 ntBASIC13.18□□□□□ -0.3
Sox18P43680 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.18□□□□□ -0.3
Sox18P43680 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Sox18P43680 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox18P43680 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox18P43680 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox18P43680 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox18P43680 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox18P43680 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox18P43680 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.18□□□□□ -0.3
Sox18P43680 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox18P43680 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox18P43680 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sox18P43680 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Sox18P43680 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox18P43680 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Sox18P43680 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox18P43680 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Sox18P43680 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Sox18P43680 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox18P43680 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox18P43680 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox18P43680 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.17□□□□□ -0.3
Sox18P43680 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Sox18P43680 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox18P43680 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox18P43680 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sox18P43680 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Sox18P43680 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox18P43680 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox18P43680 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox18P43680 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.17□□□□□ -0.3
Sox18P43680 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.17□□□□□ -0.3
Sox18P43680 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox18P43680 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox18P43680 Gm13333-201ENSMUST00000119424 781 ntBASIC13.17□□□□□ -0.3
Sox18P43680 Gm11793-201ENSMUST00000120433 981 ntBASIC13.17□□□□□ -0.3
Sox18P43680 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sox18P43680 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.17□□□□□ -0.3
Sox18P43680 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sox18P43680 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sox18P43680 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.17□□□□□ -0.3
Sox18P43680 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.17□□□□□ -0.3
Sox18P43680 Gm38223-201ENSMUST00000194484 695 ntBASIC13.17□□□□□ -0.3
Sox18P43680 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC13.17□□□□□ -0.3
Sox18P43680 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sox18P43680 Nsd1-205ENSMUST00000224693 852 ntBASIC13.17□□□□□ -0.3
Sox18P43680 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox18P43680 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox18P43680 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox18P43680 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sox18P43680 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox18P43680 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox18P43680 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC13.17□□□□□ -0.3
Sox18P43680 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox18P43680 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox18P43680 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sox18P43680 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sox18P43680 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox18P43680 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox18P43680 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Sox18P43680 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sox18P43680 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.16□□□□□ -0.3
Sox18P43680 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Sox18P43680 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Sox18P43680 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox18P43680 Gm14126-201ENSMUST00000122345 395 ntBASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms