Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.17□□□□□ -0.14
Msh2P43247 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Msh2P43247 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Msh2P43247 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Msh2P43247 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Msh2P43247 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Msh2P43247 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Msh2P43247 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Msh2P43247 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.16□□□□□ -0.14
Msh2P43247 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Msh2P43247 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Msh2P43247 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Msh2P43247 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Msh2P43247 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
Msh2P43247 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
Msh2P43247 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Msh2P43247 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.16□□□□□ -0.14
Msh2P43247 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Msh2P43247 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Msh2P43247 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Msh2P43247 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Msh2P43247 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC14.16□□□□□ -0.14
Msh2P43247 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Msh2P43247 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Msh2P43247 Gm22175-201ENSMUST00000175007 78 ntBASIC14.16□□□□□ -0.14
Msh2P43247 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Msh2P43247 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.16□□□□□ -0.14
Msh2P43247 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Msh2P43247 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.16□□□□□ -0.14
Msh2P43247 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.16□□□□□ -0.14
Msh2P43247 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Msh2P43247 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Msh2P43247 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Msh2P43247 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Msh2P43247 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Msh2P43247 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Msh2P43247 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Msh2P43247 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Msh2P43247 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.15□□□□□ -0.14
Msh2P43247 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Msh2P43247 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Msh2P43247 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Msh2P43247 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Msh2P43247 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Msh2P43247 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Msh2P43247 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Msh2P43247 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Msh2P43247 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC14.15□□□□□ -0.14
Msh2P43247 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Msh2P43247 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Msh2P43247 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Msh2P43247 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Msh2P43247 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Msh2P43247 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Msh2P43247 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Msh2P43247 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Msh2P43247 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Msh2P43247 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Msh2P43247 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Msh2P43247 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Msh2P43247 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Msh2P43247 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Msh2P43247 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Msh2P43247 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Msh2P43247 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Msh2P43247 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Msh2P43247 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Msh2P43247 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Msh2P43247 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Msh2P43247 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Msh2P43247 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Msh2P43247 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Msh2P43247 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Msh2P43247 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Msh2P43247 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.14□□□□□ -0.15
Msh2P43247 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Msh2P43247 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Msh2P43247 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Msh2P43247 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Msh2P43247 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Msh2P43247 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Msh2P43247 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Msh2P43247 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Msh2P43247 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.14□□□□□ -0.15
Msh2P43247 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Msh2P43247 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Msh2P43247 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.14□□□□□ -0.15
Msh2P43247 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Msh2P43247 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Msh2P43247 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Msh2P43247 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.14□□□□□ -0.15
Msh2P43247 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.14□□□□□ -0.15
Msh2P43247 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Msh2P43247 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Msh2P43247 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.14□□□□□ -0.15
Msh2P43247 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.14□□□□□ -0.15
Msh2P43247 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Msh2P43247 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Msh2P43247 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Msh2P43247 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms