Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Abca1P41233 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Abca1P41233 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Abca1P41233 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Abca1P41233 Gm9816-201ENSMUST00000122292 1414 ntBASIC11.42□□□□□ -0.58
Abca1P41233 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC11.42□□□□□ -0.58
Abca1P41233 Gm9856-201ENSMUST00000217077 2578 ntBASIC11.42□□□□□ -0.58
Abca1P41233 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Abca1P41233 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC11.42□□□□□ -0.58
Abca1P41233 Gm15460-201ENSMUST00000118147 391 ntBASIC11.42□□□□□ -0.58
Abca1P41233 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Abca1P41233 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Abca1P41233 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC11.42□□□□□ -0.58
Abca1P41233 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC11.42□□□□□ -0.58
Abca1P41233 Gm18905-201ENSMUST00000205454 928 ntBASIC11.42□□□□□ -0.58
Abca1P41233 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Abca1P41233 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Abca1P41233 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Abca1P41233 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Abca1P41233 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC11.42□□□□□ -0.58
Abca1P41233 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Abca1P41233 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Abca1P41233 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Abca1P41233 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Abca1P41233 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Abca1P41233 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.42□□□□□ -0.58
Abca1P41233 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Abca1P41233 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Abca1P41233 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC11.42□□□□□ -0.58
Abca1P41233 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Abca1P41233 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Abca1P41233 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC11.42□□□□□ -0.58
Abca1P41233 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Abca1P41233 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Abca1P41233 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Abca1P41233 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Abca1P41233 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Abca1P41233 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Abca1P41233 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Abca1P41233 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Abca1P41233 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Abca1P41233 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Abca1P41233 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Abca1P41233 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Abca1P41233 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Abca1P41233 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Abca1P41233 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Abca1P41233 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC11.41□□□□□ -0.58
Abca1P41233 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Abca1P41233 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC11.41□□□□□ -0.58
Abca1P41233 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Abca1P41233 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Abca1P41233 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC11.41□□□□□ -0.58
Abca1P41233 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Abca1P41233 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Abca1P41233 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Abca1P41233 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Abca1P41233 Gm24196-201ENSMUST00000179161 110 ntBASIC11.41□□□□□ -0.58
Abca1P41233 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Abca1P41233 Gm18054-201ENSMUST00000207539 555 ntBASIC11.41□□□□□ -0.58
Abca1P41233 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.41□□□□□ -0.58
Abca1P41233 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.41□□□□□ -0.58
Abca1P41233 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.41□□□□□ -0.58
Abca1P41233 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Abca1P41233 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Abca1P41233 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Abca1P41233 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Abca1P41233 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Abca1P41233 Gm37812-201ENSMUST00000195216 2475 ntBASIC11.41□□□□□ -0.58
Abca1P41233 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Abca1P41233 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Abca1P41233 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Abca1P41233 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Abca1P41233 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Abca1P41233 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Abca1P41233 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Abca1P41233 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Abca1P41233 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Abca1P41233 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Abca1P41233 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Abca1P41233 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Abca1P41233 Gm8749-201ENSMUST00000117737 331 ntBASIC11.4□□□□□ -0.58
Abca1P41233 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.4□□□□□ -0.58
Abca1P41233 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC11.4□□□□□ -0.58
Abca1P41233 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC11.4□□□□□ -0.58
Abca1P41233 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC11.4□□□□□ -0.58
Abca1P41233 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.4□□□□□ -0.58
Abca1P41233 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Abca1P41233 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.4□□□□□ -0.58
Abca1P41233 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
Abca1P41233 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC11.4□□□□□ -0.58
Abca1P41233 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Abca1P41233 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Abca1P41233 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Abca1P41233 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Abca1P41233 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Abca1P41233 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Abca1P41233 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Abca1P41233 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Abca1P41233 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms