Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox6P40645 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Sox6P40645 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Sox6P40645 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox6P40645 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC12.91□□□□□ -0.34
Sox6P40645 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Sox6P40645 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox6P40645 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sox6P40645 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sox6P40645 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Sox6P40645 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sox6P40645 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox6P40645 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox6P40645 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox6P40645 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Sox6P40645 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox6P40645 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox6P40645 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox6P40645 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox6P40645 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Sox6P40645 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sox6P40645 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox6P40645 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sox6P40645 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox6P40645 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sox6P40645 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox6P40645 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox6P40645 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC12.91□□□□□ -0.34
Sox6P40645 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.9□□□□□ -0.34
Sox6P40645 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
Sox6P40645 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox6P40645 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.9□□□□□ -0.34
Sox6P40645 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox6P40645 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox6P40645 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox6P40645 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.9□□□□□ -0.34
Sox6P40645 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox6P40645 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox6P40645 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sox6P40645 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox6P40645 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox6P40645 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox6P40645 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox6P40645 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox6P40645 Mir449b-201ENSMUST00000104833 80 ntBASIC12.9□□□□□ -0.34
Sox6P40645 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Sox6P40645 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Sox6P40645 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sox6P40645 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sox6P40645 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sox6P40645 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Sox6P40645 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Sox6P40645 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sox6P40645 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox6P40645 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Sox6P40645 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Sox6P40645 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox6P40645 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox6P40645 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Sox6P40645 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Sox6P40645 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.9□□□□□ -0.35
Sox6P40645 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Sox6P40645 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Sox6P40645 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox6P40645 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox6P40645 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.89□□□□□ -0.35
Sox6P40645 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Sox6P40645 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Sox6P40645 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox6P40645 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Sox6P40645 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Sox6P40645 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox6P40645 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox6P40645 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sox6P40645 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sox6P40645 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Sox6P40645 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.89□□□□□ -0.35
Sox6P40645 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sox6P40645 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox6P40645 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.89□□□□□ -0.35
Sox6P40645 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.89□□□□□ -0.35
Sox6P40645 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Sox6P40645 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox6P40645 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox6P40645 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox6P40645 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox6P40645 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox6P40645 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sox6P40645 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sox6P40645 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sox6P40645 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Sox6P40645 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.88□□□□□ -0.35
Sox6P40645 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox6P40645 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox6P40645 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox6P40645 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox6P40645 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox6P40645 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.88□□□□□ -0.35
Sox6P40645 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox6P40645 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms