Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cd9P40240 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.52□□□□□ -0.25
Cd9P40240 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cd9P40240 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.52□□□□□ -0.25
Cd9P40240 Gm9797-201ENSMUST00000052902 613 ntBASIC13.52□□□□□ -0.25
Cd9P40240 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Cd9P40240 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cd9P40240 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Cd9P40240 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.25
Cd9P40240 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cd9P40240 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cd9P40240 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cd9P40240 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.52□□□□□ -0.25
Cd9P40240 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Cd9P40240 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cd9P40240 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cd9P40240 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cd9P40240 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cd9P40240 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Cd9P40240 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Cd9P40240 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Cd9P40240 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cd9P40240 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cd9P40240 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cd9P40240 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cd9P40240 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cd9P40240 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.51□□□□□ -0.25
Cd9P40240 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cd9P40240 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cd9P40240 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cd9P40240 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cd9P40240 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.51□□□□□ -0.25
Cd9P40240 Syt7-204ENSMUST00000223586 1344 ntBASIC13.51□□□□□ -0.25
Cd9P40240 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cd9P40240 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.51□□□□□ -0.25
Cd9P40240 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cd9P40240 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.51□□□□□ -0.25
Cd9P40240 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cd9P40240 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.51□□□□□ -0.25
Cd9P40240 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.51□□□□□ -0.25
Cd9P40240 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Cd9P40240 Gm19078-201ENSMUST00000206311 727 ntBASIC13.51□□□□□ -0.25
Cd9P40240 Gm20949-201ENSMUST00000206478 952 ntBASIC13.51□□□□□ -0.25
Cd9P40240 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.51□□□□□ -0.25
Cd9P40240 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cd9P40240 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cd9P40240 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Cd9P40240 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cd9P40240 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cd9P40240 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cd9P40240 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cd9P40240 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.51□□□□□ -0.25
Cd9P40240 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cd9P40240 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.51□□□□□ -0.25
Cd9P40240 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cd9P40240 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cd9P40240 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cd9P40240 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cd9P40240 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.5□□□□□ -0.25
Cd9P40240 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cd9P40240 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cd9P40240 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cd9P40240 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cd9P40240 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cd9P40240 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cd9P40240 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Cd9P40240 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cd9P40240 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cd9P40240 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Cd9P40240 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cd9P40240 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Cd9P40240 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cd9P40240 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.5□□□□□ -0.25
Cd9P40240 Gm26464-201ENSMUST00000157094 305 ntBASIC13.5□□□□□ -0.25
Cd9P40240 Gm43094-201ENSMUST00000196549 921 ntBASIC13.5□□□□□ -0.25
Cd9P40240 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cd9P40240 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.5□□□□□ -0.25
Cd9P40240 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.5□□□□□ -0.25
Cd9P40240 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Cd9P40240 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cd9P40240 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cd9P40240 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cd9P40240 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cd9P40240 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cd9P40240 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cd9P40240 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cd9P40240 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cd9P40240 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cd9P40240 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.5□□□□□ -0.25
Cd9P40240 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cd9P40240 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cd9P40240 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cd9P40240 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cd9P40240 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cd9P40240 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cd9P40240 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cd9P40240 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cd9P40240 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cd9P40240 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Cd9P40240 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms